Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00624 ATGGCCACTCAAGAAAACGAGGAAGACCAGATAATCAACCCCTTCACAATGCTCCTCCTAGAGGATCACGACAAACACGGAACCTCCACTACCCTACACCAGGCTGCACCCAATCACCACCTGCTCCAGAACCATTTTCTCTCTTCGATTCAATCAACGCTCACCATTCGTCAGCTACCTTCCGAGGGTCTCTCCTTCCAGCTCTGGCCCGCCGCCACCTCTCTCGTCTCCCTACTCGATCGCTACCGCGCTGACCCTTCATCCAGCCCTCTCTCCGCCGCGCTCAATGGCCGTCTCAGGATCCTCGAGCTCGGTTCCGGCACGGGCATCGTGGGAATCGTCGCCGCCGCAACTCTCGGCGGCCACGTGACCCTGACGGACCTTCCTCATGTAGTTCCTAATCTGAAATTCAACGCGGACGCGAACGCAGGGGTTGTGGGGCCCAGAGGCGGGAAATTAACAGTTGCGCCTCTGTGGTGGGGCCACGCTGATGACGTGGAAGCGATCGGACGGGATTTCGATCTTATTGTAGCATCGGATGTAGTGTATCACGATCACCTTTATGAGCCTCTGCTCGAAACCCTGCGTTTGATGATGCTAACAGAAGGTGCGGTGAGAGAGCGGAAGGAGAAGATGATCTTTTTGATGGCGCATATGAAAAGGTGGAAGAAGGAATCGGCGTTTTTTAGGAAGGCAAAAAAGCACTTTCATGTTGATGTTTTGCATACTGATCCTCCTTGTGATGGATCTAGGGTTGGCGTTGTTGTTTACCGTTTCGTTGGGAAGACTTAG 792 0.5379 MATQENEEDQIINPFTMLLLEDHDKHGTSTTLHQAAPNHHLLQNHFLSSIQSTLTIRQLPSEGLSFQLWPAATSLVSLLDRYRADPSSSPLSAALNGRLRILELGSGTGIVGIVAAATLGGHVTLTDLPHVVPNLKFNADANAGVVGPRGGKLTVAPLWWGHADDVEAIGRDFDLIVASDVVYHDHLYEPLLETLRLMMLTEGAVRERKEKMIFLMAHMKRWKKESAFFRKAKKHFHVDVLHTDPPCDGSRVGVVVYRFVGKT 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00624 263 PANTHER HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN 28 245 IPR019410 -
Vimu11g00624 263 CDD AdoMet_MTases 100 196 - -
Vimu11g00624 263 Gene3D Vaccinia Virus protein VP39 38 259 IPR029063 -
Vimu11g00624 263 Pfam Lysine methyltransferase 51 234 IPR019410 -
Vimu11g00624 263 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 82 196 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00624 Vimu-Chr11 6732723 6733514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00624 K21805 - gmx:100796318 404.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00624 11 6732723 6733514 Vimu11g00624 11 6732723 6733514 ECH