Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00614 ATGAGACATAGGATTTCCTATTTGATGGACGAGATCTGGGAGCGGGCTGTGGAGACGGCCTTAGACGGCGAGAAGGACCATGCGTCCGCCCGGACGCTAACCCTAGATGGCGCCGTTAAGTGCGTGCAGGGACGGTTACCTCCTCCGACCCTACTTGAAAGGTTCCAGAACCTTCAGCACCTTTCCATCGCAAACGTTGGTGTTTCAACGTTGGAGCAGTTTCCTCGGCTCCGGAATCTGCAAAAGCTGAATCTCTCCGACAACCGGATCGCCGGAGGGTTGGAGTTTCTTGTCCAGGCTGGCCTCGATTCGCTGCGTGACCTTGATTTGTCGAACAATCGGATTCAGTACATTGAGGATCTCGCGCCGCTGGCGCAGGTCAAGCTGGTTTCGCTGGATCTGTACGAGTGTCCCGTGACCCGTGTGAAGGATTATCGATCTAGGGTTTTTGGGTTGATTAAGTCGCTCAAGTACTTGGATAAGATGGATGCGGAGGAGAACGAGAGGCCTGAAAGTGATGATGAAGAAGAGGAGGAAGAGGAAGAGGAGGAGGAAGATGACCCTGGGAGTGGCGAGATTGACGGAGAAGAAGATCGACCTCATGGTATTAACAATGGACACAGCGAGGGCGTTGATGGTGTTGTTGATGCGGATGAGGAGGAAGAGAGTGATGCGGATGAGGAGGAGACGGAGACGTCGAGGCGGGTTACCAATGGCGATAATCACCGGGAGAATGGATTCCGTGTTGTGCCTGTAGAAGGGGACGACGTGGAGGAGGACGATGACGAGGATGATTCTGGTGAGGAAATTGATGAGGAGGAGGGCGATGATGATGATGTGGTTGAGGTTCATGAGATTGAGGATAGCGACGATGAGGATGGAGTGGAATATGATGAGGATGATGACGACGATGATGACGATGAGGAGGAAGTGGATAATGATGAGGGTGATTTTGCGGAACCGGAGAGTACTGGGAGGTTAACGAGTACCGAGGGCGAGATTGATGGGCATGAACAGGGGGAGGAGGATGGAGACGAGGATGATAATGGCGAGACTGGGGAAGATGAGATGGGGGTTGAAGACGATGGCGATTTTGAAGATGACGATGAATTCCCATCAAATGCAGGAACTGGAACGGAGTGGACTCTTGCAGATAAGGGAAACAATGTAGTAGTATTAGAAGAAGACTATGGTGGTGGGTACCTTGTTCAGCCAGTTGGACAGTCTGATCCTCTGAATTCTGCTGGAGTTGTTGCTGATGTGGATGGTGGAAATGATGAGGGTGAAGAGGAAGATGAAGTTGATGATGACGATGAAGATGTTCAGGTGTTACCTCCTGACTCATCACACATGAAGAGGAAGAGGAATGATGAAGAAGAAGATGATGAGGAGAGTGATGATGAAGATGTGGTAGCATTCACTAAGTCATCGAAGAAGCATCATTGA 1446 0.5069 MRHRISYLMDEIWERAVETALDGEKDHASARTLTLDGAVKCVQGRLPPPTLLERFQNLQHLSIANVGVSTLEQFPRLRNLQKLNLSDNRIAGGLEFLVQAGLDSLRDLDLSNNRIQYIEDLAPLAQVKLVSLDLYECPVTRVKDYRSRVFGLIKSLKYLDKMDAEENERPESDDEEEEEEEEEEEDDPGSGEIDGEEDRPHGINNGHSEGVDGVVDADEEEESDADEEETETSRRVTNGDNHRENGFRVVPVEGDDVEEDDDEDDSGEEIDEEEGDDDDVVEVHEIEDSDDEDGVEYDEDDDDDDDDEEEVDNDEGDFAEPESTGRLTSTEGEIDGHEQGEEDGDEDDNGETGEDEMGVEDDGDFEDDDEFPSNAGTGTEWTLADKGNNVVVLEEDYGGGYLVQPVGQSDPLNSAGVVADVDGGNDEGEEEDEVDDDDEDVQVLPPDSSHMKRKRNDEEEDDEESDDEDVVAFTKSSKKHH 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00614 481 MobiDBLite consensus disorder prediction 443 459 - -
Vimu11g00614 481 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Vimu11g00614 481 Coils Coil 162 182 - -
Vimu11g00614 481 ProSiteProfiles Leucine-rich repeat profile. 79 98 IPR001611 GO:0005515
Vimu11g00614 481 MobiDBLite consensus disorder prediction 214 228 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 423 442 - -
Vimu11g00614 481 Pfam Leucine-rich repeat 64 174 - -
Vimu11g00614 481 SMART LRR_sd22_2 77 96 - -
Vimu11g00614 481 SMART LRR_sd22_2 102 123 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 163 387 - -
Vimu11g00614 481 FunFam acidic leucine-rich nuclear phosphoprotein 32-related protein-like 13 175 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 254 318 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 229 253 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 401 481 - -
Vimu11g00614 481 PANTHER ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 18 467 IPR045081 -
Vimu11g00614 481 ProSiteProfiles Leucine-rich repeat profile. 104 125 IPR001611 GO:0005515
Vimu11g00614 481 SUPERFAMILY L domain-like 48 164 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 336 373 - -
Vimu11g00614 481 MobiDBLite consensus disorder prediction 167 193 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00614 - - gmx:100809629 465.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00614 11 6619076 6621858 Vimu11g00614 11 6619076 6621858 ECH