Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00595 ATGGCTTTTAAGAAAACCCTAGCCCAGCGCCTCCTCAACATAACCAAAATCTCCAATTACCGCATTTCCTCCTCCGTTCGTTCTCCCAATCCGGCCAAACCTGACATTGCTCCGGATCCCGGAGATAGCGGAATCTTCCGCCGCTTCCTCCACAAGAGGCCAGTCCTCTCCTCCGACCTCCGACAGCCGGCTGCCGGCTCCATCCTCCACCGCCTCCGGGAGATGGACATTGCACGGAGCCGGATCCGGTTGGACGGACTCACTCCACCGGAAAAACAAGAAGTAGAGGCCAAAGATGTGAGGAAGGTGCTCAGAGCCGTTCAAATAGAAACAGTGAAATCCAAGTTACGGAAAATTCCGGAGAGTTGCATAACGTACTCGGAGTTCATGCGAATGTGCGTGGAGGGTTGCTCCGATCCGGAGCAAGCGAGGATCATCGCGAAGATGCTGGACGATTCAGCCTCTGTTATCATCTTAGGCGATGTCGTTTTCCTCCGACCTGAACAGGTAGCAAAAACGATTCAGTCTATCCTACCTCTAGCAGGAGCAAGGACTATTGAGTCAGAAAGAAAAGAGTTGGAAGAAATGGAGAAAGTGAAAGCAGCAATTGATGAGAGAGCAAACACCTTGGTTCGACGTGAACTATGGGCTGGGTTGTGGTTTCTAGTGGCACAAACATTAGGATTCATGAGACTCACATTTTGGGAACTATCTTGGGATGTGATGGAACCAATATGCTTCTATGTTACTTCCATGTACTGCATTGCTGGCTACACCTTCTTCGTCAGAACCTCCAAAGAGCCTTGTTTTGAAGGCTTTTACCAAAGCCGTTTCGCCAGCAAGCAGAAGCGTCTAATGAAACTTCACAATTTTGACATTGGCAGGTATAAGGAACTCAAGGCTGTTGCACCATCGTCACCCTCTTCCCAGATTGATTCATCATTTCTTATTCAACCATTTGACCAATTTCACAAAAAATTGTAG 984 0.4848 MAFKKTLAQRLLNITKISNYRISSSVRSPNPAKPDIAPDPGDSGIFRRFLHKRPVLSSDLRQPAAGSILHRLREMDIARSRIRLDGLTPPEKQEVEAKDVRKVLRAVQIETVKSKLRKIPESCITYSEFMRMCVEGCSDPEQARIIAKMLDDSASVIILGDVVFLRPEQVAKTIQSILPLAGARTIESERKELEEMEKVKAAIDERANTLVRRELWAGLWFLVAQTLGFMRLTFWELSWDVMEPICFYVTSMYCIAGYTFFVRTSKEPCFEGFYQSRFASKQKRLMKLHNFDIGRYKELKAVAPSSPSSQIDSSFLIQPFDQFHKKL 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00595 327 Coils Coil 186 213 - -
Vimu11g00595 327 Pfam Mitochondrial calcium uniporter 141 299 IPR006769 -
Vimu11g00595 327 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 31 304 IPR039055 GO:0051560
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00595 Vimu-Chr11 6363232 6366651 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00595 K20858 - gmx:100785566 462.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00595 11 6363232 6366651 Vimu11g00595 11 6363232 6366651 ECH