Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00570 ATGTTACGGGCATGTTTTGGGTTGAATTACCATGGTAGAATGGAGGAGCTGCCAGGGGCGTTTGGAAGCAGCGCCAGTTTGGCTCTCCGATTGGGTCAAACAGTTTTTTCCACAGCTTCCCTTCTCTTCATGTGTTTGGATGTTGATTTCTACGGTTACACTGCTTTCTGGTATCTCTTTCTCTCTTTCTCTCTGTTTCTGACTTTGGTTTTGTCATGTTGTTCATCTTCTTCATACGCCCAATTGAGGGTCTTTTCTTATTCTGTCACTCACTGCTTCACCAAATTCGGTAACTTTTGCCGATTTCATCATGCCCCATCATCTGATTTTCTAAAGGAGAGTGATGTACTGTGGGCAAGAAACATGAGTAAAGGTAAGGAAGGGGGGATTGTGGAAGAAAGTCACTATTTGGTAACAGTCATGGGTTTGGTAATTCCCTGGAGCATAACACTGTTGGTTGTGGATGCATACTCTGTGTTTATAAAATGTTTACCCCTCCAACGAAGACTCGTAATGATAGTCTTTTTGGGAGACATGATTTTGTCATATCTGTCATTAGCTGCAGCGTGTTCAACAGCCAGTGTCACAGATCTGCTGCTCGATGCCGATCGATCCTATTGCCCAGCAAAGCTATGTGGTAGATATCAACTATCTGCTGCTATGGCCTTCTTGTCTTGGTTTCTTTCATCGGCCTCTTGTCTGTTTAACTTCTGGCTTTTCCCTTCTTTGTAA 732 0.4344 MLRACFGLNYHGRMEELPGAFGSSASLALRLGQTVFSTASLLFMCLDVDFYGYTAFWYLFLSFSLFLTLVLSCCSSSSYAQLRVFSYSVTHCFTKFGNFCRFHHAPSSDFLKESDVLWARNMSKGKEGGIVEESHYLVTVMGLVIPWSITLLVVDAYSVFIKCLPLQRRLVMIVFLGDMILSYLSLAAACSTASVTDLLLDADRSYCPAKLCGRYQLSAAMAFLSWFLSSASCLFNFWLFPSL 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00570 243 Pfam Casparian strip membrane protein domain 135 228 IPR006702 -
Vimu11g00570 243 PANTHER CASP-LIKE PROTEIN 5B3 14 242 IPR045009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00570 Vimu-Chr11 6065773 6067725 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00570 - - gmx:100306215 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00570 11 6065773 6067725 Vimu11g00570 11 6065773 6067725 ECH