Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00568 ATGCGTAGAATATTACAACAGTACGTGGATACCAAAAGCGATACTGTAGTTGATAGTTTAATTGATTCCGATCTAAATGAGCTCAAGCTTGCGGCCAAGAAGCTCCTCCACGATGCAACCCTTGTAGGAGGCAAAGTCTTTGGCGATTCTTTCTTTAAATGGCTCGCTTCCTTCGCTGCCATAGGTGATGTGGGAAAATGGATTGCATTCGTCGCAGTTGTGCTGAGGCTTTTCTTCCCTAGACATTTTCCTGATTGGCTGGAAATTCCTGGTTCGATGATTCTTATTTTGATAGTAGCACCCGACATATTTGCTCAGAAATTAAGGAATAACTGGATTGGATTAGCGATTGATCTTTTCATTGGTTGTTACCTACTACAAGAACATATCAGGGCTTCTGGTGGATTCAGAAATTCTTTCACACAGAAACATGGAATATCAAATACTCTTGGCATCCTCCTCCTCATTGTCTATCCTATTTGTGCTTTCATTATCCATTAA 501 0.4072 MRRILQQYVDTKSDTVVDSLIDSDLNELKLAAKKLLHDATLVGGKVFGDSFFKWLASFAAIGDVGKWIAFVAVVLRLFFPRHFPDWLEIPGSMILILIVAPDIFAQKLRNNWIGLAIDLFIGCYLLQEHIRASGGFRNSFTQKHGISNTLGILLLIVYPICAFIIH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00568 166 Pfam Cold acclimation protein WCOR413 62 155 IPR008892 GO:0016020
Vimu11g00568 166 Pfam Cold acclimation protein WCOR413 12 61 IPR008892 GO:0016020
Vimu11g00568 166 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 62 164 IPR008892 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00568 Vimu-Chr11 6041712 6042569 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00568 - - gmx:100817084 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00568 11 6041712 6042569 Vimu11g00568 11 6041712 6042569 ECH