Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00256 ATGCAAATGGTGGTTGCGTGTGTCCCTCTACATAATCTTTCTTCTGGCAGGCCAATCTTCAGCTACTCTTCTGGGAAGCACAAATTAACTAACGAGCTGATCAATGATTCCCATAAAACAAAACCAAAACTTTCTATCCTTGTTTTCCTCTACCTAGCTTTTGGCTTAATCCTGACAGGGGACAACTTGATGTATTCCTATGGACTTCTATATCTCCCTCTTTCCACCTATTCTCTGCTGTGTGCAACCCAATTAGGCTTCAATGCAATCTTCTCTTTCTTCCTCAATTCGCAGAAGTTCACAGCATTCATATTCAATTCTATAGTCCTACTTACCATATCAGCTTCCCTGCTTGCAATCGATGCTGATTCTGAGGATCAAATGGGACTTTCGAGAGAAAAACATATAATTGGGTTCTTCTGCACTATTGGTGCATCAGCTACATTTTCTCTATATCTCTCTCTTGTGCAGCTTTCTTTTGAGAAGGTTATCAAGAGAGAAACGTTTACTGTTGTGTTAGACATGCAAATTTACCCATCCTTCATTGCTACCTGTGCTTGTGTTGTGGGCCTGTTTGCAAGTGGAGAGTGGAAAAGTTTGGATGAGGAAAGTAAGAATTATGAGAAGGGAATGGTGTCATATGTAATGACTCTACTTTGGACCGCTGTGACATGGCAAATATCATCTATTGGTATGCTTGGGTTGATTTTTGAGGTATCTTCATTGTTTTCAAATGTGATAGGTACCTTGTCATTGCCCATTGTTCCCATCCTTGCAGTGATCTTCTTCCATGACAAGGTGAATGGGGTGAAGTTTATAGCCTTGTTGTTAGCAGCGTGGGGCTTTCTATCTTATGTGTATCAACATTACATAGATCACAAAAAAGCCAAGACAGATAAAAGCCAATGCACAGCCACACTTTTGGGAAGGTTCTACTTTCACAAAGGTGGTAAAAGCATATGGATTGAAACATGTGCTCAATCTGGTGGGTTCCCTATACTAATTCCACTCCTATTTTACTCTGCCAAATCAACCAACCATGATTCCTTCAAAACCAAAACCGAACCAAGAAGCTCAGTTATGATTCCCTTGTACCTAGGTTTTGGTCTACTTATGGCAGTAACGGACCTCTTGTATTCCTATGGACTTTCATGTCTTCCTCTTTCCACTTTTGCCCTAGTTTGTGCCACCCAACTAGCCTTCAATGCTGTAGCTACTTACTTAATCAATTCCCAAAAGTTCACTGCATTGATATTAAACTCTGTAGTTGTTCTTACTATGTCAGTTATCCTAATCGCACTGAACACTGAATCGGAGGACACAAACCTTCCGAAAGAGAAGCTACTAAGCGGGATCTTCTGTGTCCTTGCTGCATCTGCCATGTTTTCTTTACATCACTCTCTCTTGCAGCTCTATTTTGTGAAGATTGCAAAGACAGAAGAAACCTATCCTTCTCTGCTGAAGATGAATTTTTACCCCATGCTCGTTGCTGCAGTCGCTGGCCTTGTGGGATTGTTTGGAAGCGGAGATTGGAGAAGTATGGGAAGAGAGATGAAGGAGTTTAAATACGGTGGAGTGTCTTACGTAATGACTCTAGTTTGGATTGCTGTGACATGGCAAATAGGATGCATTGGTATGTTAGGGTTGATTTTCGAGGTATCTTCATTGTTCTCTGTTGTAATAGGTAACCTGGAACTCACCGTAACTCCTATGCTTGCTGTGCTTGTGTTTCATGACAAGATTTATGGGGTGAAGATTATAGCCTTCTTGTTAGCTATATGGGGCTTTCTGTCCTATATATACCAACATTATCTCGATGACCAAAAGGCCAAGGCAGATAAAATTGATGATGGCCTTGGCCTTTCAAAGGTAGAAGAACAAATTTCATAA 1890 0.409 MQMVVACVPLHNLSSGRPIFSYSSGKHKLTNELINDSHKTKPKLSILVFLYLAFGLILTGDNLMYSYGLLYLPLSTYSLLCATQLGFNAIFSFFLNSQKFTAFIFNSIVLLTISASLLAIDADSEDQMGLSREKHIIGFFCTIGASATFSLYLSLVQLSFEKVIKRETFTVVLDMQIYPSFIATCACVVGLFASGEWKSLDEESKNYEKGMVSYVMTLLWTAVTWQISSIGMLGLIFEVSSLFSNVIGTLSLPIVPILAVIFFHDKVNGVKFIALLLAAWGFLSYVYQHYIDHKKAKTDKSQCTATLLGRFYFHKGGKSIWIETCAQSGGFPILIPLLFYSAKSTNHDSFKTKTEPRSSVMIPLYLGFGLLMAVTDLLYSYGLSCLPLSTFALVCATQLAFNAVATYLINSQKFTALILNSVVVLTMSVILIALNTESEDTNLPKEKLLSGIFCVLAASAMFSLHHSLLQLYFVKIAKTEETYPSLLKMNFYPMLVAAVAGLVGLFGSGDWRSMGREMKEFKYGGVSYVMTLVWIAVTWQIGCIGMLGLIFEVSSLFSVVIGNLELTVTPMLAVLVFHDKIYGVKIIAFLLAIWGFLSYIYQHYLDDQKAKADKIDDGLGLSKVEEQIS 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00256 629 PANTHER OS09G0467300 PROTEIN-RELATED 33 299 IPR030182 GO:0015211|GO:0016020
Vimu11g00256 629 Pfam Purine nucleobase transmembrane transport 301 609 - -
Vimu11g00256 629 Pfam Purine nucleobase transmembrane transport 32 295 - -
Vimu11g00256 629 SUPERFAMILY Multidrug resistance efflux transporter EmrE 358 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00256 Vimu-Chr11 2540119 2545808 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00256 361 616 Organic Solute Cotransporters AT1G44750 50.379 7.73e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00256 - - gmx:100819773 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00256 11 2540119 2545808 Vimu11g00256 11 2540119 2545808 ECH