Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00243 ATGAAATTCTCTTCGTACTTACTGATATTGTTTATCTTTCTCTTTCTCTTTCTGTTTCAAAGCTCCAATAGTTCTAATCTTATCTCTCAATCTTGCAAGGAGGCATCGAAGAATGACCCAAATTTGAAGTATGATTTCTGTGTTGAATCTCTTGAAGATGCTTCCTCCAAGTTGCAACCACCACCGACCAACCTGGAAGGTCTTGTGTGCATGTCAACTCAACTTACCAAGTCCAACGGAAGCAACATGGTTTCCATCATTTCAAAGCTCTTGAAGGATAAAAGTTATGATGAATACGTAAAGGCTTGCTTACGAGATTGCTTTGATCTTTACTCGGATTCCCTTTCGGATTTAGATGATGCTGTGGTTGCTATCAAGCAGAAGGATTTTGACACTGCTGCTATAAAGTTGAGTGCTTCCTTGGATAACTCTGATACATGTGAAGATCAATTCAAGGAAAAGAAGGGTGAAATTTCTCCTTTAACAAAGGAAAATCAAGTCCACTTCCAACTCAATGTAATATCCCTGGCCTTCCTCCAAATGTTTCGCCAACATTATTGA 561 0.3886 MKFSSYLLILFIFLFLFLFQSSNSSNLISQSCKEASKNDPNLKYDFCVESLEDASSKLQPPPTNLEGLVCMSTQLTKSNGSNMVSIISKLLKDKSYDEYVKACLRDCFDLYSDSLSDLDDAVVAIKQKDFDTAAIKLSASLDNSDTCEDQFKEKKGEISPLTKENQVHFQLNVISLAFLQMFRQHY 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00243 186 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 32 - -
Vimu11g00243 186 NCBIfam pectinesterase inhibitor domain 1 181 IPR006501 GO:0004857
Vimu11g00243 186 CDD PMEI-Pla_a_1_like 32 181 IPR034088 -
Vimu11g00243 186 Pfam Plant invertase/pectin methylesterase inhibitor 26 177 IPR006501 GO:0004857
Vimu11g00243 186 SMART PMEI_2 23 178 IPR006501 GO:0004857
Vimu11g00243 186 FunFam Putative invertase inhibitor 23 182 - -
Vimu11g00243 186 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 182 IPR035513 -
Vimu11g00243 186 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 25 182 IPR035513 -
Vimu11g00243 186 PANTHER OS02G0537100 PROTEIN 10 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00243 Vimu-Chr11 2454571 2455131 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00243 - - gmx:100817110 239.965
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00243 11 2454571 2455131 Vimu11g00243 11 2454571 2455131 ECH