Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00241 ATGTGCTCCTCAAGGTCTACCACTCCATCAAGACCTTCTTACTTGGAACAAGACCACGGTCTGGCTTCCTTAACAGACATGGATGCTTGCCATCGAGCCAACAATTTCGTATCTAGGTCCATGACCATGGGTTACGCCACATCCTACACCAGAACCGGATTAAGGAACACCCTTCCCGTTTTCTCACCGAGATCTAAGACATTCCACGACACCAGATTCGAGGATCACCACTCTCACTTCCTCGCCGCTTGTTTCCTCTGTAAAAAGACACTCGGGGACAACAGAGACATCTTCATGTACAGGTCAGTCAACCACCCACGGCAACACCCTTTGTTACAATTTTTCTTTTTTAATCTTTTTGGGTTACCGAAAGACCCTTTTGATTGCAAATTAGATCTGATCGGGATTATGATTGTTTGTTGCAGAGGGGACACCCCTTTTTGTAGCCAGGAGTGCAGGCAAGAACAAATAGATATAGACGAAGCGAAAGAGAAAAACATGAATCTTTCTTCATCGATGAAAGCTTTGAGGAATAAGGAACAAAGAAAATCGACGTCGCCAAACAAGGCGCAAGGCTACTCGTTCCGTACGGGGGCAGTTGCGGCGGCTTAG 612 0.4641 MCSSRSTTPSRPSYLEQDHGLASLTDMDACHRANNFVSRSMTMGYATSYTRTGLRNTLPVFSPRSKTFHDTRFEDHHSHFLAACFLCKKTLGDNRDIFMYRSVNHPRQHPLLQFFFFNLFGLPKDPFDCKLDLIGIMIVCCRGDTPFCSQECRQEQIDIDEAKEKNMNLSSSMKALRNKEQRKSTSPNKAQGYSFRTGAVAAA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00241 203 MobiDBLite consensus disorder prediction 170 203 - -
Vimu11g00241 203 Pfam zinc-finger of the FCS-type, C2-C2 138 163 IPR007650 -
Vimu11g00241 203 Pfam zinc-finger of the FCS-type, C2-C2 71 101 IPR007650 -
Vimu11g00241 203 PANTHER FCS-LIKE ZINC FINGER 1-RELATED 141 201 IPR044533 -
Vimu11g00241 203 Coils Coil 152 179 - -
Vimu11g00241 203 ProSiteProfiles Zinc finger FLZ-type profile. 79 164 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00241 Vimu-Chr11 2406103 2406714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00241 - - aprc:113849917 241.506
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00241 11 2406103 2406714 Vimu11g00241 11 2406103 2406714 PCT