Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00235 ATGGACGGTCTGATGAAGGGCTTGGTCGATCTTGCTATCGGTGGTGCCGATCACAACGATCGCCAAGAAGAACACGGTGAACGCTCCTGGGCCGACCTTGTCTCCGGCGATCAGGATCAGGATCACCCTCGTCCTCATCGGCAGCAGCAGCAGCAACAGACACAGTGGTCCAACTCACCCCAAAAGGAAGAACGGTGGGAAGAAGATAGTCACAGTTATACCAACAGGCCCCATCAGGTGAATGTCAATCACTTGTTCTCAATTATTAAATCCAATGCCATACTCTTCTCATATGTAGCTCTTCATGCAGTATATCGTCCTCAGCATGAGGAGAGCCAATCTCAAAATTTCAACACTGGCCACAAGGTGAATGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTTCAAGGCCGCCACAAAAGGTTACTGAAGATCAAGATGGATGGCAGACTGTTGGCAAACCTCCAAGGCGGACACAAAAGGTTCCGAAGGAAACTTGGCAGAACTACAAACGGCCTTCTCATGAGCAAGAATACTCTGATGAGGTTGAAGTCGGTGTTAGTTTGGAGCCCTCAGAAGATGAACTTGCTGATCTATCAAAAGCTTGTGACAAACTCTGGGATCTTGATTTAAATCGGTTGGTACCTGGCAAAGACTATGAAATTGACTGTGGTGAAGGGAAAAAGGTTTTCCAAAAGCAAGATATGGCAGAGGGGACCTTGTTTACTTGGGTTAGTGATGATGTATTCAGAAAGCCTACATTTGCTCGTTTTCTCTCACTTCTAGATAATTACAATCCACATGAAGGATGTAAGGAAGTAGTCACATCCGAAGAGAGACAAGAGCAAGCTTCTTTCATAGAAGAAATCAGTAGAACAGCACCAATTAAATATCTTCACAAGTATCTTGCATCTAAGGGAATTGCATCAGGGAGTTACCAAGAGTTCAAACGAATGATGACCAATCTATGGTTTGACCTTTATGGCCGTGGTGGCACTTCTGGCTCCTCTTCTTCTTTTGAACATGTTTTTGTTGGAGAAATCAAACAAAGCGGCGAAGTTTCTGGCTTCCATAACTGGCTGCAGTTTTACCTTGAAGAGGAAAAGGGGAGAGTTGATTATCAGGGCTATATTTTCCCCCGTCGACGGGGAGAAACTCCTGATTCGGAAACGCAGCTTCTAACTGTTCAGTTTGAATGGAATGGTGTTCTGAAATCTTTATCAAGCACTTTGGTTGGAGTGAGCCCTGAGTTTGAAATTGCTTTATATACCCTGTGTTTTTATGTTGGTAGGGAGGATAACCACATTCAACTCGGTCCATACGCAGTTAATATCAAGTGCTATCGTTTTGGCAATAAGATTGGATCTGTTTTCCCCATTGCAGAGTCTTGA 1395 0.4444 MDGLMKGLVDLAIGGADHNDRQEEHGERSWADLVSGDQDQDHPRPHRQQQQQQTQWSNSPQKEERWEEDSHSYTNRPHQVNVNHLFSIIKSNAILFSYVALHAVYRPQHEESQSQNFNTGHKVNEDQDGWQTVGKPSRPPQKVTEDQDGWQTVGKPPRRTQKVPKETWQNYKRPSHEQEYSDEVEVGVSLEPSEDELADLSKACDKLWDLDLNRLVPGKDYEIDCGEGKKVFQKQDMAEGTLFTWVSDDVFRKPTFARFLSLLDNYNPHEGCKEVVTSEERQEQASFIEEISRTAPIKYLHKYLASKGIASGSYQEFKRMMTNLWFDLYGRGGTSGSSSSFEHVFVGEIKQSGEVSGFHNWLQFYLEEEKGRVDYQGYIFPRRRGETPDSETQLLTVQFEWNGVLKSLSSTLVGVSPEFEIALYTLCFYVGREDNHIQLGPYAVNIKCYRFGNKIGSVFPIAES 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00235 464 CDD XendoU 196 460 IPR018998 GO:0004521
Vimu11g00235 464 MobiDBLite consensus disorder prediction 111 126 - -
Vimu11g00235 464 ProSiteProfiles Eukaryotic uridylate-specific endoribonuclease (EndoU) domain profile. 196 464 IPR018998 GO:0004521
Vimu11g00235 464 MobiDBLite consensus disorder prediction 159 182 - -
Vimu11g00235 464 PANTHER PLACENTAL PROTEIN 11-RELATED 59 463 IPR039787 GO:0004521
Vimu11g00235 464 Pfam Endoribonuclease XendoU 199 460 IPR018998 GO:0004521
Vimu11g00235 464 MobiDBLite consensus disorder prediction 16 46 - -
Vimu11g00235 464 SUPERFAMILY EndoU-like 198 462 IPR037227 -
Vimu11g00235 464 MobiDBLite consensus disorder prediction 111 182 - -
Vimu11g00235 464 MobiDBLite consensus disorder prediction 15 76 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00235 K14648 - gmx:100813919 582.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00235 11 2278772 2282266 Vimu11g00235 11 2278772 2282266 ECH