Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00135 ATGCGAATGGAGGAAGCCCTTGCGGAGCTGGAGCGAGTCCAAACCCAGCTCCTGCAACGCATATCCAAACTCGAGCATTCTTATCTTCCTTCATCGCTTTCTAAAAACGACACCGTTCAGGACGCTGGCACCGACACCGTGGCTCGCCTCTCCTCCATTTTGCGCAGCAACGGCGTTCCCGAATTCTCCTTTAAGAGAGTCCCTTCTGATTACTACGATTGGCCTCTCGAAGCCCGTCGCGACGCCCTCTCCGCCGCCTCAATCCACCATCTCTGCAAAAGCATCGTTCTCGTTAATACACAAGCGCCTGCTAACGTCGTCGATTGCACCAATCGCAATAATTCCAAGTATTACGTCGTAGTCGTTCAGTACACTGCTCGCTTTAACGCCGAAGCTGTCAAGAATTTTCTGTATTCGCTCAACAATGGAAGTATTGCGAAGAAGAAATTCAACATGAGGCTAGCTCCTGAGGAGACATCAATGGAATTAACTGGATACGGGCACAATGCAGTGACTTGTATTGGCATGAAAACAGACATTCCGGTGATTTTGGATGAGGCAATCGTAAAGCTAACTCCAGATTTCTTTTGGTTGGGTGGTGGTGAGGTTGATCTGAAGCTAGGGATCCGAACATCTCAATTGATCAAATTTATCAACCCCTTCATTGTCAACTGTAGCAGTAATTGA 687 0.4803 MRMEEALAELERVQTQLLQRISKLEHSYLPSSLSKNDTVQDAGTDTVARLSSILRSNGVPEFSFKRVPSDYYDWPLEARRDALSAASIHHLCKSIVLVNTQAPANVVDCTNRNNSKYYVVVVQYTARFNAEAVKNFLYSLNNGSIAKKKFNMRLAPEETSMELTGYGHNAVTCIGMKTDIPVILDEAIVKLTPDFFWLGGGEVDLKLGIRTSQLIKFINPFIVNCSSN 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00135 228 CDD YbaK_like 77 223 - -
Vimu11g00135 228 Coils Coil 7 27 - -
Vimu11g00135 228 Gene3D - 56 226 IPR036754 GO:0002161
Vimu11g00135 228 PANTHER UNCHARACTERIZED 33 227 - -
Vimu11g00135 228 Pfam Aminoacyl-tRNA editing domain 88 217 IPR007214 GO:0002161
Vimu11g00135 228 SUPERFAMILY YbaK/ProRS associated domain 67 225 IPR036754 GO:0002161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00135 - - var:108338253 443.736
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00135 11 1228292 1232259 Vimu11g00135 11 1228292 1232259 ECH