Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00131 ATGGCTTCGAAGGGTGCTCTTCTCTTGTGTCTGAACATCTTGTTTTTCAGTGTGGTTAGCTGCACATACGTGCCATGCAACCCACCCCCAAAAGCTCCAAAAAAGCCACCACACACACCTGTGCCAAAGCCACCTTCCACAAAGTATGGGAGTTGCCCTGTAGACACCCTTAAGTTTGGTGTGTGCGCTGATGTGTTGGGTTTGATCGGCGTGCAGCTTGGGAAGCCACCAAAGACACCATGCTGCAACCTCATCCAAGGCCTTGCTGATCTTGAAGCTGCCGTCTGCCTTTGCACTGCTCTCAAAGCTAACGTCTTGGGCATCAACCTCAATGTCCCCATCAAGTTGAATTTGCTTCTCAACTACTGTGGAAAGAAAACTCCTAAGGATTTCCTCTGCAATTAA 405 0.4914 MASKGALLLCLNILFFSVVSCTYVPCNPPPKAPKKPPHTPVPKPPSTKYGSCPVDTLKFGVCADVLGLIGVQLGKPPKTPCCNLIQGLADLEAAVCLCTALKANVLGINLNVPIKLNLLLNYCGKKTPKDFLCN 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00131 134 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Vimu11g00131 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 55 133 IPR036312 -
Vimu11g00131 134 FunFam pEARLI1-like lipid transfer protein 1 50 134 - -
Vimu11g00131 134 Pfam Hydrophobic seed protein 52 133 IPR027923 -
Vimu11g00131 134 PANTHER - 3 133 - -
Vimu11g00131 134 CDD HPS_like 50 133 IPR027923 -
Vimu11g00131 134 Gene3D - 51 134 IPR036312 -
Vimu11g00131 134 SMART aai_6 52 133 IPR016140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00131 Vimu-Chr11 1203714 1204118 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00131 45 133 Acyl Lipid Metabolism Gene Families AT4G22490 33.708 2.15e-12 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00131 - - gmx:100500229 221.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00131 11 1203714 1204118 Vimu11g00131 11 1203714 1204118 ECH