Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00127 ATGTCTCCAAAATCAAAAGCCAAAGCCATGTTCTTCATCTTGAAAATAACAATGTTAAACTTTTTGCCACCAATATATGCATGTGGTTCTTGCACTCCGCCACGTCACCCCAAGCACCCACCGCATCACGGCGGAGGCACGCCAAAAGTATCCCCTCCTCTCCCACCGATCATAATCAACCCTCCGGTGGTGCCCCCGCCGGTCGTCATTTACCCTCCACCAATCTCACCACCGTACTCGCCGCCGCATCGGACATGCCCAATTGATGCTCTAAAGTTGGGACTTTGCTTGGACGTGCTCGGAGGATTGGTGCATGTGGGAATAGGGAACCCAGTGGAGAACGTGTGCTGTCCCGTAATACAAGGGTTGCTTGACCTTGAAGCTGCAATTTGTCTTTGCACCGTTATTCGGGCTAAGCTTCTGAACCTGAATATCTTCCTACCTCTTGCACTTCAAGTTTTGATCACTTGTGGGAAGACTCCTCCTCCTGGTTTTGTTTGTCCACCTCTCTACTGA 516 0.5039 MSPKSKAKAMFFILKITMLNFLPPIYACGSCTPPRHPKHPPHHGGGTPKVSPPLPPIIINPPVVPPPVVIYPPPISPPYSPPHRTCPIDALKLGLCLDVLGGLVHVGIGNPVENVCCPVIQGLLDLEAAICLCTVIRAKLLNLNIFLPLALQVLITCGKTPPPGFVCPPLY 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00127 171 CDD HPS_like 83 167 IPR027923 -
Vimu11g00127 171 PANTHER - 7 167 - -
Vimu11g00127 171 SMART aai_6 86 167 IPR016140 -
Vimu11g00127 171 Pfam Hydrophobic seed protein 85 168 IPR027923 -
Vimu11g00127 171 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 169 IPR036312 -
Vimu11g00127 171 Gene3D - 84 169 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00127 Vimu-Chr11 1190382 1190897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00127 76 169 Acyl Lipid Metabolism Gene Families AT4G22490 34.043 3.10e-10 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00127 - - gmx:100802510 241.121
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00127 11 1190382 1190897 Vimu11g00127 11 1190382 1190897 ECH