Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00124 ATGGCTTCCAAAACTTCTTCTTCCCTTGTTGTTCTTTTCCTCTTCTTTGCCATTGCCTCTGCCACTAAGCCAAGTTACGGAGGTTATGGTGGTTCCGGAGGTTCAGGTGGCTCAGGTGGTTCAGGAGGCAATGGAGGTTCTGGTGCCTCATGCCCTCGTGATGCACTCAAACTAGGAGTGTGTGCCAATGTTCTAAACGGCTTGCTCAACGTCAAACTGGGTCAACCACCAGTTACCCCTTGCTGCACCCTCCTCGATGGTCTCCTTGACCTTGAAGCTGCAGCCTGCCTCTGCACTGCCCTCAGAGCAAACATCTTAGGCATCAACCTCAACCTTCCCATCTCACTTTCCCTCCTTCTCAACGTTTGCTCAAGGCAGGTTCCACGTGATTTCCAATGTGCCTGA 405 0.5185 MASKTSSSLVVLFLFFAIASATKPSYGGYGGSGGSGGSGGSGGNGGSGASCPRDALKLGVCANVLNGLLNVKLGQPPVTPCCTLLDGLLDLEAAACLCTALRANILGINLNLPISLSLLLNVCSRQVPRDFQCA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00124 134 CDD HPS_like 49 133 IPR027923 -
Vimu11g00124 134 PANTHER - 9 133 - -
Vimu11g00124 134 FunFam pEARLI1-like lipid transfer protein 1 49 134 - -
Vimu11g00124 134 SMART aai_6 51 133 IPR016140 -
Vimu11g00124 134 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 53 133 IPR036312 -
Vimu11g00124 134 Gene3D - 49 134 IPR036312 -
Vimu11g00124 134 Pfam Hydrophobic seed protein 51 134 IPR027923 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00124 Vimu-Chr11 1176632 1177036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00124 50 133 Acyl Lipid Metabolism Gene Families AT4G22490 42.857 3.14e-14 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00124 - - vum:124823417 157.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00124 11 1176632 1177036 Vimu11g00124 11 1176632 1177036 ECH