Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00123 ATGGCTTCCAAAACTACCTCTTCCCTTGCTCTTTTCTTCACATTCAACATCCTCTTCTTTGCCCTTGTCTCTGCTTGTGGGACTTGCCCTGGGCCAAAGCATAAGCCTGTCAAACCAAGTCCTTCAGGTGGTTCAGGTGGCTCGGGAGGTTCCGGTGGCTCAGGTGGTTCGGGTGGTTCAGGTGGCTCCGGTGGATCTGGTGGTTCAGGTGGCTCTGGTGGTTCTGGAGGTTCTGGGACCACATGCCCCCGTGATGCACTCAAACTAGGAGTGTGTGCCAATGTGCTAAATGGGTTGGTGAACGTGACCTTGGGTCAACCACCAGTTACCCCTTGCTGTAGCCTCCTCAATGGTCTGGTTGATCTTGAGGCTGCTGTATGTCTCTGCACTGCCCTTAGAGCAAACATTTTGGGTATCAATCTCAACCTTCCCATCTCACTCTCCTTGCTTCTCAACGTTTGCTCTATACAACCCCCACGTAATTTCCAATGTTCCTAA 498 0.5181 MASKTTSSLALFFTFNILFFALVSACGTCPGPKHKPVKPSPSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGGSGTTCPRDALKLGVCANVLNGLVNVTLGQPPVTPCCSLLNGLVDLEAAVCLCTALRANILGINLNLPISLSLLLNVCSIQPPRNFQCS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00123 165 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 84 164 IPR036312 -
Vimu11g00123 165 MobiDBLite consensus disorder prediction 34 77 - -
Vimu11g00123 165 Gene3D - 80 165 IPR036312 -
Vimu11g00123 165 SMART aai_6 82 164 IPR016140 -
Vimu11g00123 165 MobiDBLite consensus disorder prediction 44 77 - -
Vimu11g00123 165 CDD HPS_like 80 164 IPR027923 -
Vimu11g00123 165 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 26 - -
Vimu11g00123 165 FunFam pEARLI1-like lipid transfer protein 1 80 165 - -
Vimu11g00123 165 Pfam Hydrophobic seed protein 81 165 IPR027923 -
Vimu11g00123 165 PANTHER - 6 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00123 Vimu-Chr11 1166810 1167307 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00123 81 164 Acyl Lipid Metabolism Gene Families AT4G22490 40.476 1.96e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00123 - - gmx:100499716 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00123 11 1166810 1167307 Vimu11g00123 11 1166810 1167307 ECH