Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00112 ATGTCGTCTGGGATTCAGCAGAGGAGGAGTTCGTGGCAAGATGGTGTTCTCGGCACGAATTGTCCCATTCCTTCTAAGTGGAACTGGACTTACCAGTTTCAGGTCAAGGATCAAATTGGAAGCTTTTTCTACTTCCCTTCCCTTCATCTTCAGAGGGCTGCTGGTGGATTTGGGGGTTTCATTATAAACAACCGACCCATCATTCCTATTCCTTTTGATACCCCATATGGGGACATTGTCAGTCATAACTTACTTCTAGCAGAGACAGAGGGGTCTTACACAGTGCAACAGAACTACACTAGCTTAGATATTCATGTTGGGCAATCTTATTCTTTTCTGGTAACCATGGACCAAAATGCAAGTTCAGATTACTACATTGTAGCGAGTGCCAGGTTTGTGAATGAATCACGTTGGCAAAAAGTAACTGGAGTTGCTATCTTGCGCTATACAAATTCCAAGGGGAAGGCGCATGATGGAATGTATCAGCAAGTGGTGCTCGTCCTAACCCACAAGGGTCTTTCAGATATGGTTCCATCAATGTGA 543 0.4438 MSSGIQQRRSSWQDGVLGTNCPIPSKWNWTYQFQVKDQIGSFFYFPSLHLQRAAGGFGGFIINNRPIIPIPFDTPYGDIVSHNLLLAETEGSYTVQQNYTSLDIHVGQSYSFLVTMDQNASSDYYIVASARFVNESRWQKVTGVAILRYTNSKGKAHDGMYQQVVLVLTHKGLSDMVPSM 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00112 180 PANTHER MULTI-COPPER OXIDASE 4 78 IPR045087 -
Vimu11g00112 180 Pfam Multicopper oxidase 3 65 IPR011707 GO:0005507
Vimu11g00112 180 Gene3D - 73 165 IPR008972 -
Vimu11g00112 180 Gene3D - 2 64 IPR008972 -
Vimu11g00112 180 SUPERFAMILY Cupredoxins 4 83 IPR008972 -
Vimu11g00112 180 SUPERFAMILY Cupredoxins 81 156 IPR008972 -
Vimu11g00112 180 Pfam Multicopper oxidase 79 151 IPR001117 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00112 Vimu-Chr11 1032572 1037542 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00112 - - egt:105972160 169.859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00112 11 1032572 1037542 Vimu11g00112 11 1032572 1037542 ECH