Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00061 GAGCAATATGTAACTGAGGTTACTGAGAATTATGAGACAATATGCTGGGGTTGTGGACTGCGTGTTTTGCTTCCATCATGTGCATCTGCTTTCAAATGTGGCTGGTGTGGGGCTATTACAGATCAGAACAAAAAGAAACGTGACCAGAGTTCTAAAAATGGACTTAATTATTTTGTTATTTTCTTGTACATGTTTTTTTGTGCAGTTGGTGGGGTTTGGGCAGTTTATCCTGTTGTCTTTTCTATCAGTATTCTTTGTGGAGTTTTTCACTCAATCGTCACAGCAGCACTGTCCATTGCCACCGTTTCCTTTTTCAGCTTTTCAGCATTTAGGTGTGCTGGCGCACCACCAAATGTGGTATGGGGAAGCTACCCTGCTGTAGGGAAAGGTGACCTTGAAAATTATACTTTTTGTCACTACTGCTCGAAACCAAAGTCACCTAGAGCTCATCATTGTCGTTCTTGTAGAAAATGCATCCTGGACATGGATCATCACTGCCCATTTATTGGGAACTGTGTTGGTGCAGCTAATCACCGGAGCTTCGTTGGCTTTCTGATTTCTGCAGTGTTGAGTACAATCTATGTCTCTATCATGTCTGTATATGCAGGCTCGCATCTGTGGCCACCGTTGAAATACTCCCTTAGGCACATAGACGGGGTTAGTGGAACCTATCTGGCATGGAGAATTTTGAATGAAATTGTTGTTGCATTCCTGAGATCTGCCCTGCTTCTTTCCTCCAGAGGACTTATTCTTGCTTATCTGTTCATTGCAAGTGTTTCGTTGCAGATAGGATTGGCCGTTCTTTTGTGGCAGCAGCTCTCCTATATATACGAGGGGAAAACTTATTTGAGTCACTTGAGTCCACAAGCAGATAATGAAGAAGAGAAGAAAGATTGTCAAAACCTTGTTAGATTTTTTGGTGTTCAATATTCTGTAACGAGATTTTTGCCAAACTTCCGTGTTACTCGAAAGAGACACACCAAATGA 987 0.4205 EQYVTEVTENYETICWGCGLRVLLPSCASAFKCGWCGAITDQNKKKRDQSSKNGLNYFVIFLYMFFCAVGGVWAVYPVVFSISILCGVFHSIVTAALSIATVSFFSFSAFRCAGAPPNVVWGSYPAVGKGDLENYTFCHYCSKPKSPRAHHCRSCRKCILDMDHHCPFIGNCVGAANHRSFVGFLISAVLSTIYVSIMSVYAGSHLWPPLKYSLRHIDGVSGTYLAWRILNEIVVAFLRSALLLSSRGLILAYLFIASVSLQIGLAVLLWQQLSYIYEGKTYLSHLSPQADNEEEKKDCQNLVRFFGVQYSVTRFLPNFRVTRKRHTK 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00061 328 Pfam DHHC palmitoyltransferase 135 284 IPR001594 GO:0016409
Vimu11g00061 328 PANTHER PALMITOYLTRANSFERASE ZDHHC16 58 321 - -
Vimu11g00061 328 ProSiteProfiles DHHC domain profile. 136 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00061 Vimu-Chr11 541008 545826 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g00061 126 197 Lipid Metabolism Gene Families AT4G22750 44.444 7.91e-13 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00061 - - gmx:100792359 555.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00061 11 541008 545826 Vimu11g00061 11 541008 545826 ECH