Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g00060 ATGGAAGAAGAGGGTAACGGGAAGGGTGAAGAGGCATTCAGGAACACAAGGGTGCCACCATGGACAAAACAAATCACAGTGAGATCAGTGGTCACAAGCTTTCTTCTCAGTCTTGTTTTCAACTTCATTGTGTGCAAACTCAACTTCACAACAGGGATCATTCCATCCCTCAATGTAGCTGCTGGGTTGTTGGGGTTTGCAGTGATCAAGTCCTACACTACCCTCCTCAACAAATGTGGCCTTCTCAGAGAACCTTTCACTCGCCAGGAGAACACTGTCATTCAAACCTTCGTTGTTGCATCTTCTGGAATTGCATTCAGCAGTGGCATGGGAAGTTATCTACTTGGGATGAGTCCATACATTTCTGCTCAAGTTGATGGGGGGAACACACCAATCAATACAAAAAGTCTCTCCCTTGGCTGGATGTTTGGTTTCCTCTTTGTTGTTAGTTTTGTTGGTCTCTTCTCTATAGTGCCCCTGAGAAAGATGATGATTTTGAAGTACAAACTAACATACCCTAGTGGAACTGCCACAGCTCTACTTGTCAATAGCTTACACACACCAAAAGGAGCAAAACTAGCAAAGAAACAGGTTGCTTTGCTATTCAAAAGTTTTTGTGGCAGCTTTGCTTTTGGTTTTTTCCAGTGGTTTTTCACTGCAGGAGATGATTGTGGGTTCAGCACTTTTCCCACATTTGGTCTCCAAGCCTACAGCAAAAGGTTCTACTTTGATTTCTCATCTACCTATGTTGGAGTTGGAATGATTTGCCCTTACTTGATAAATGTATCTCTGCTTCTTGGAGCAATAATCTCATGGGGAATCCTATGGCCTTGGATTGAGCAAAAGAAAGGAATCTGGTATAGTGCAGATATACCTCCTAGCAGTCTAAGTAGCATCCAAGGATATAGGGTCTTCACTGCAATTGCTATGATGCTTGGTGACGGTCTTTACCATTGTGTCATCATGCTGATAAGAGTTGCCTATAGTCTTATCACGGAACACCTTAAGAAAAAAGAGTCACTCCATCTAAACCCGGACGATGTTGATCAAATACCAAGTGCAGATTTAGATACTCAACGTCGCACTGAGTATTTCTTGAAAGATCAGATTCCCTCTTGGACCGCTTTCAGTGGCTACATTGTTCTTGCAGTTATTTCCATCGTAACAGTGTCACACATCTTTCCTCAGCTGAAATGGTATCATGTACTAATCACTTACCTCATGGCTCCTATTCTAGCCTTCTGCAATGCCTATGGATGTGGCCTCACTGATTGGTCTTTGGCATCAAACTATGGCAAAGTGGCCATAATTATATTCAGTTCATGGGTTGGCCTTGAGAATGGAGGCATCATTGCAGGCCTTGCATCGTGTGGTGTCATGATGAGCATTGTTTCAACAGCTTCTGATTTGATGCAAGACTTCAAAACCGGGTACCTCACCCTTGCATCTCCAAGATCCATGTTTGTTAGCCAAGTTTTAGGTACTGCCACAGGGTGTCTTGTGTCCCCTTTGATGTTTTGGTTCTTCCACAAGGCCTACACACTTGGTGACCCTCAAGGCTCTTACCCTGCACCCTATGGAGAAGTTTACCGTGGAATGGCCCTTCTTGGGGCAAAAGGTTTCTCTTCTCTCCCCAAACATTGTCTCCAATTGGCTATCATATTCTTTTTCTTGGCTGTGTTTATTAACATAGTGCGTGATTTGTTGGTGCATTATGAGACCAAGTATAGGATATATAGGTTTGTTCCTAACGCCATGGCTTTGGCCATCCCATTCTATCTTGGTGGGTACTTTGCTATTGACATGTGCATTGGGAGCTTGATTCTGTTTTTGTGGGAGAAAAAGAACAAATCAAAAGCAAATGATTTTGGTCCTGCTTTAGCATCTGGACTTATATGTGGTGATTCTTTGTGGAGTGTTCCTGCTGCTATACTGAGCCTTGCTGGAGCCAGTCCACCAATTTGCATGAAGTTCTTGTCTAGTGCTGTCAATAAGAAGGTTGACACCTTCTTGAATGGTGGTCCTTGA 2028 0.4334 MEEEGNGKGEEAFRNTRVPPWTKQITVRSVVTSFLLSLVFNFIVCKLNFTTGIIPSLNVAAGLLGFAVIKSYTTLLNKCGLLREPFTRQENTVIQTFVVASSGIAFSSGMGSYLLGMSPYISAQVDGGNTPINTKSLSLGWMFGFLFVVSFVGLFSIVPLRKMMILKYKLTYPSGTATALLVNSLHTPKGAKLAKKQVALLFKSFCGSFAFGFFQWFFTAGDDCGFSTFPTFGLQAYSKRFYFDFSSTYVGVGMICPYLINVSLLLGAIISWGILWPWIEQKKGIWYSADIPPSSLSSIQGYRVFTAIAMMLGDGLYHCVIMLIRVAYSLITEHLKKKESLHLNPDDVDQIPSADLDTQRRTEYFLKDQIPSWTAFSGYIVLAVISIVTVSHIFPQLKWYHVLITYLMAPILAFCNAYGCGLTDWSLASNYGKVAIIIFSSWVGLENGGIIAGLASCGVMMSIVSTASDLMQDFKTGYLTLASPRSMFVSQVLGTATGCLVSPLMFWFFHKAYTLGDPQGSYPAPYGEVYRGMALLGAKGFSSLPKHCLQLAIIFFFLAVFINIVRDLLVHYETKYRIYRFVPNAMALAIPFYLGGYFAIDMCIGSLILFLWEKKNKSKANDFGPALASGLICGDSLWSVPAAILSLAGASPPICMKFLSSAVNKKVDTFLNGGP 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g00060 675 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 7 660 IPR045035 GO:0035673
Vimu11g00060 675 NCBIfam OPT family oligopeptide transporter 20 644 IPR004813 GO:0035673
Vimu11g00060 675 Pfam OPT oligopeptide transporter protein 24 645 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g00060 Vimu-Chr11 534079 537196 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g00060 - - gmx:100791307 1190.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g00060 11 534079 537196 Vimu11g00060 11 534079 537196 ECH