Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03771 ATGAGATGCAATGAACTGAGTAACATACAGACTTCTTATTCAAGATTCAATCCCAATTTGCATCGAGACTTATCCCAGAATGTCTCCACGTCCACTGCTACTTTTCTTCGTCTTTATGCTTCTCTTTCACGCTCTACGTTCTTCAGACGTTTCAACAACCAAGTAAGTAACAACTCCACTCTCCCCTTTTATTTTATTTTTTTGTCTTTGCTTTTCTCCTCCCAATCCTCATTTCTTCTTTTCTACAGAGCTTCTATGTCCCTCTATGATTGCGACCAATGTCATCGCGCTAAGGAACGCGACATTTCCACGAATAGAAACCGCCTCAATCCCAATGAAAAGGACATTGATATAATTGCAACATACAGCGGTGCTTCTGGCCATGTTAGACTTGCTAGGTTGAAAATGAGGGATTTATCTGATTCCTGGATCTGGGAAAACCCTACTAATGGAAACAACGAGTATCAAAAGAGCTCCCAGGAATCGATGGAATCGTATCAAACTGATTCAAGTTTTGAAGACAATTCCAAGCACTCCATAGATGAACGTAATCCTGAAGAAAACAAAGTTGAAATTCCCCATTCCTCGTTAATGACACCGATGAAGATCAAACGTCGAGTAATGCGGCAAGAAAGAAAGAAAGCCCGTACCGCTGAACTTACACAGGAAAACCGAGAAACTAACAATCACATTGTATCAGCAGCAATTAAACGCACTGAAGAATTTGATACCACTGTCAAGGGAAAGTATAGTATATGGAGGAGAGAATATGAAAACCCAAATTCTGATTCAACTCTGAAACTCATGCGTGATCAAATAATAATGGCCAAAGCCTATGCTAATATTGCAAAGTCTAAGAACAATACTGTTCTATACGAAGCTCTTCTCAAGCACTCCAGTGATAGTCAACGGGCTATAGGAGAAGCAAGTTCTGATACAGAGCTTCACCTTGGAGCACTTGATCGGGCAAAAGCTATGGGTCATGTTCTTTCCATAGCAAAGGATCAACTTTACGACTGCCTTTTGGTGGAAAGGAAATTAAGGGTGATGCTTCAATCAACAGAAGATAGAGTCAATGTACAGAAGAAAAGGAGTGCATTCTTGATTCAGCTGGCTGCAAAAACTGTGCCTAGACCATTACATTGTCTTCCCCTGCAACTTGCAGCGGATTATTACCTGCAGGGCTATCATAAGAAAGGAAATCTTGACAAAGAAAAGATTGAAGATCCATCTCTCTACCATTATGCTATATTTTCTGATAATGTGCTGGCTGCATCTGTGGTTGTTAATTCTACTGTGCAAAACGCGAAGGAACCTGAGAAGCATGTGTTCCATATAGTGACGGATAAATTGAATTTTGCAGCAATGAGAATGTGGTTTCTCACCAACCCTCCTTCTAGAGCAACTATTGAAGTTCAGAATATTGATGATTTCAAGTGGTTGAATTCCTCGTATTGTTCTGTTCTACGTCAACTTGAATCAGCAAGAATCAAGGAATATTACTTTAAAGCTAATAATCCTTCCTCCCTATCTGTTGGTTCTGACAATCTAAAATATAGAAATCCTAAATACTTGTCGATGTTAAATCACTTAAGGTTCTACCTTCCTGAAGTTTATCCAAAATTAAACAGAATTCTATTCTTGGATGATGACATTGTAGTGCAGAGGGATTTGACACCACTTTGGTCAGTTGATTTGAAAGGTATGGTGAATGGTGCTGTGGAAACGTGCAAGGAGAGCTTCCATAGGTTTGATAAATACCTAAACTTTAGTAATCCACTGATTTCCAATAACTTCAGTCCTGAGGCGTGTGGCTGGGCATTTGGCATGAATATTTTTGACTTGAAGGAGTGGAAGAAACGAAACATTACTGGTATCTATCATCGATGGCAAGATATGAATGAGGACAGAACCCTCTGGAAGCTTGGAACCTTACCTCCCGGACTAATCACCTTTTATAATCTGACCTATCCGTTAGATCGAGGATGGCATGTTTTGGGACTTGGCTATGACCCAGCTCTGAACCTGACAGAGATAGAGAATGCCGCTGTCATTCACTACAATGGAAATTACAAGCCATGGTTAAATCTTGCTGTTTCCAAATATAAATCTTACTGGTCCAGATATGTTAAGTTGGATAATCCATACCTTCGAGTTTGCAATCTTGGTGAATAG 2175 0.3986 MRCNELSNIQTSYSRFNPNLHRDLSQNVSTSTATFLRLYASLSRSTFFRRFNNQVSNNSTLPFYFIFLSLLFSSQSSFLLFYRASMSLYDCDQCHRAKERDISTNRNRLNPNEKDIDIIATYSGASGHVRLARLKMRDLSDSWIWENPTNGNNEYQKSSQESMESYQTDSSFEDNSKHSIDERNPEENKVEIPHSSLMTPMKIKRRVMRQERKKARTAELTQENRETNNHIVSAAIKRTEEFDTTVKGKYSIWRREYENPNSDSTLKLMRDQIIMAKAYANIAKSKNNTVLYEALLKHSSDSQRAIGEASSDTELHLGALDRAKAMGHVLSIAKDQLYDCLLVERKLRVMLQSTEDRVNVQKKRSAFLIQLAAKTVPRPLHCLPLQLAADYYLQGYHKKGNLDKEKIEDPSLYHYAIFSDNVLAASVVVNSTVQNAKEPEKHVFHIVTDKLNFAAMRMWFLTNPPSRATIEVQNIDDFKWLNSSYCSVLRQLESARIKEYYFKANNPSSLSVGSDNLKYRNPKYLSMLNHLRFYLPEVYPKLNRILFLDDDIVVQRDLTPLWSVDLKGMVNGAVETCKESFHRFDKYLNFSNPLISNNFSPEACGWAFGMNIFDLKEWKKRNITGIYHRWQDMNEDRTLWKLGTLPPGLITFYNLTYPLDRGWHVLGLGYDPALNLTEIENAAVIHYNGNYKPWLNLAVSKYKSYWSRYVKLDNPYLRVCNLGE 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03771 724 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 415 715 IPR029044 -
Vimu10g03771 724 Pfam Glycosyl transferase family 8 382 697 IPR002495 GO:0016757
Vimu10g03771 724 SUPERFAMILY Nucleotide-diphospho-sugar transferases 413 720 IPR029044 -
Vimu10g03771 724 MobiDBLite consensus disorder prediction 150 191 - -
Vimu10g03771 724 CDD GT8_like_1 413 711 - -
Vimu10g03771 724 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 219 722 IPR029993 GO:0047262
Vimu10g03771 724 MobiDBLite consensus disorder prediction 174 190 - -
Vimu10g03771 724 MobiDBLite consensus disorder prediction 150 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03771 Vimu-Chr10 46397050 46400486 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03771 110 724 Glycosyltransferase AT4G38270 66.720 0.0 890
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03771 K13648 - gmx:100781749 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03771 10 46397050 46400486 Vimu10g03771 10 46397050 46400486 ECH