Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03765 ATGAAGATGGCGCTGCTCAAGGCACCCACACCCCAACTGCAATGGCGCTGCAGTGTTGCGCCCACCACGCTGGCGTTTCCTTCTTCTCATTCCATTTCTACGGGAAGGGGAAAAGGAAGAGAGTGGAGTTGGAGGGTGAAATGCAGCAGCAGTGCCGGTGCGGAGATTGAGAAAGGGACTGCCAATTTTGGGCCGGGGAGCCCAGTCAGGCCAACCAGCATTCTAGTGGTGGGGGGCACCGGAACACTTGGAAGGCAGATTGTGCGACGGGCACTCGACGAAGGCTACGACGTCAGGTGTCTGGTCAGGCCCAGGCCCGCTCCTGCCGACTTCCTTCGCGATTGGGGAGCAACCGTTGTCAATCACTCTCTTCACTCTCTTCTTCCCGTTCTCCAGGCTGACCTCAGTAAACCAGAGACCATTCCTGCTACCTTGGTCGGCATTCACACCGTCATTGACTGCGCCACTGGCCGTCCCGAGGAGCCTATCAAAACCGTAGACTGGGAAGGAAAAGTGGCTCTCATACAATGTGCCAAGGCAATGGGCATTCAGAAATATGTCTTCTACTCCATCCACAATTGTGACAAACATCCCGAGGTTCCCCTCATGGAAATCAAGTATTGCACTGAGAAGTTCCTCCGTGATTCTGGCCTCAATCACATCGTCATCCGCTTATGCGGTTTCATGCAGGGTCTTATTGGTCAGTACGCAGTTCCCATCCTTGAAGAAAAATCTGTTTGGGGAACTGATGCCCCCACCAGAATAGCTTACATGGATACTCAGGATATAGCTCGCTTGACATTTATAGCCATACGAAATGAGAAATTAATTGGTAAACTTCTTACATTCGCTGGTCCCCGTGCTTGGACAACCCAAGAGGTAATAACCTTGTGCGAGAGGCTCGCTGGCCAAGATGCTAATGTCACCACAGTTCCAGTCTCCATTTTAAGATTCACTCGTCAGTTGACTCGCGTGTTTGAGTGGACAAATGATGTTGCTGACAGACTCGCATTTTCAGAGGTCCTTAGCAGCGATACTGTGTTTTCTGTTCCAATGGCGGATACATATAATCTTCTTGGAGTTGATTCAAAAGACATAGTTACACTGGAAAAGTATTTGCAAGACTACTTCAGTAACATATTAAAGAAATTGAAGGATCTCAAGGCCCAGTCAAAGCAAACGGATATTTACTTCTGA 1197 0.4954 MKMALLKAPTPQLQWRCSVAPTTLAFPSSHSISTGRGKGREWSWRVKCSSSAGAEIEKGTANFGPGSPVRPTSILVVGGTGTLGRQIVRRALDEGYDVRCLVRPRPAPADFLRDWGATVVNHSLHSLLPVLQADLSKPETIPATLVGIHTVIDCATGRPEEPIKTVDWEGKVALIQCAKAMGIQKYVFYSIHNCDKHPEVPLMEIKYCTEKFLRDSGLNHIVIRLCGFMQGLIGQYAVPILEEKSVWGTDAPTRIAYMDTQDIARLTFIAIRNEKLIGKLLTFAGPRAWTTQEVITLCERLAGQDANVTTVPVSILRFTRQLTRVFEWTNDVADRLAFSEVLSSDTVFSVPMADTYNLLGVDSKDIVTLEKYLQDYFSNILKKLKDLKAQSKQTDIYF 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03765 398 CDD SDR_a5 74 287 - -
Vimu10g03765 398 FunFam uncharacterized protein ycf39 isoform X1 73 374 - -
Vimu10g03765 398 Pfam NmrA-like family 74 306 IPR008030 -
Vimu10g03765 398 PANTHER - 38 398 IPR044256 -
Vimu10g03765 398 Gene3D - 73 360 - -
Vimu10g03765 398 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 74 366 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03765 Vimu-Chr10 46348483 46351458 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03765 - - gmx:100797608 702.975