Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03744 ATGGCTGTTTCGGCTATCACTGGAGCGAGGCTAACCCTAGGGATGCCTCTTTCCTCTCCCGCACTCACACGCAGAACAACTTCTCCTTCGCTCGTTATGGCCGTCTCCATTGACCACAAGGTCGACAACAAACTCACTCTTACCAAGTCCGAGGAGGCTTTCGCTGCTGCCAAGGAGCTGTTGCCTGGAGGTGTGAACTCCCCAGTTCGTGCCTTCAAATCGGTAGGTGGTCAACCAATTGTGATTGATTCAGTTAAAGGGTCTCGCATGTGGGACATCGATGGAAATGAATACATTGACTACGTCGGTTCTTGGGGTCCTGCCATTATTGGACACGCTGATGATCAGGTGCTTGCAGCTCTGGGTGAAACCATGAAAAAAGGAACCAGCTTTGGTGCACCCTGTTTGTTGGAAAACACTTTGGCTGAGCTGGTTATCGATGCCGTCCCTAGCATTGAAATGGTTCGGTTTGTCAATTCAGGCACGGAAGCTTGTATGGGTGCGCTCCGTCTTGCACGTGCTTATACAGGACAAGAGAAGATCATCAAGTTTGAGGGGTGTTATCATGGCCATGCAGATCCTTTTCTTGTTAAGGCTGGCAGTGGAGTTGCCACCTTAGGACTTCCTGATTCCCCTGGTGTCCCCAAAGCTGCCACGTATGAAACCCTTACAGCCCCCTACAATGACATCTTGGCCGTTGAGAAGCTCTTTGAGAATAACAAAGGAGAAATTGCCGCTGTTTTCCTGGAACCTGTTGTTGGAAACGCTGGTTTCATTGTTCCTACACCTGAATTTCTTAATTTCTTGCGCAAAATCACCAAAGACAACAATACCCTTCTTGTGTTTGATGAAGTTATGACCGGATTTCGATTGTCATATGGAGGTGCTCAAGAGTATTTTGGTATAACTCCTGATTTAACAACTCTTGGAAAGATTATTGGTGGAGGTTTGCCGGTGGGCGCTTATGGTGGGAGGAGGGATATCATGGAGATGGTGGCACCAGCTGGCCCAATGTACCAGGCTGGGACCTTGAGTGGGAACCCTTTGGCCATGACTGCAGGCATACATACCCTGCAGCGTATTAAGGAGCCAGGAACTTACGAGTACTTAGACAAAGTCACAGGTGAGCTTATTCAGGGCATAATTGAAGCTGGGAAGAGGGCAGGCCATGCAATATGTGGTGGGCATATAAGTGGGATGTTTGGTTTTTTCTTCACAGAAGGACCCGTGTATAATTTTGCAGATGCCAAGAAGAGTGACACTGCCAAATTTGCTAGGTTCTTTTGGGGAATGCTGGCAGAAGGTGTCTATTTGGCACCATCCCAGTTTGAGGCTGGCTTCACCAGCTTGGCACATACTTCTGATGACATTAAAAAGACAATAGCCGCTGCTGAAAAAGTTTTCAGAGAGATCTGA 1416 0.4802 MAVSAITGARLTLGMPLSSPALTRRTTSPSLVMAVSIDHKVDNKLTLTKSEEAFAAAKELLPGGVNSPVRAFKSVGGQPIVIDSVKGSRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENTLAELVIDAVPSIEMVRFVNSGTEACMGALRLARAYTGQEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATYETLTAPYNDILAVEKLFENNKGEIAAVFLEPVVGNAGFIVPTPEFLNFLRKITKDNNTLLVFDEVMTGFRLSYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLQRIKEPGTYEYLDKVTGELIQGIIEAGKRAGHAICGGHISGMFGFFFTEGPVYNFADAKKSDTAKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03744 471 FunFam Glutamate-1-semialdehyde 2,1-aminomutase 115 363 - -
Vimu10g03744 471 Gene3D - 115 363 IPR015421 GO:0003824
Vimu10g03744 471 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 49 471 IPR004639 GO:0033014|GO:0042286
Vimu10g03744 471 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 280 316 IPR005814 GO:0008483|GO:0030170
Vimu10g03744 471 CDD OAT_like 54 468 IPR005814 GO:0008483|GO:0030170
Vimu10g03744 471 Gene3D Aspartate Aminotransferase, domain 1 52 464 IPR015422 GO:0003824
Vimu10g03744 471 NCBIfam glutamate-1-semialdehyde 2,1-aminomutase 49 470 IPR004639 GO:0033014|GO:0042286
Vimu10g03744 471 SUPERFAMILY PLP-dependent transferases 47 470 IPR015424 -
Vimu10g03744 471 Pfam Aminotransferase class-III 79 388 IPR005814 GO:0008483|GO:0030170
Vimu10g03744 471 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 33 470 - -
Vimu10g03744 471 FunFam Glutamate-1-semialdehyde 2,1-aminomutase 357 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03744 Vimu-Chr10 46241110 46242874 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03744 K01845 - gmx:547795 866.3