Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03742 ATGGAGTTGGCACAACTAGAAGCATTGTGCGAGAGGCTGTACAATTCGCAGGACTCGGTAGAACGTGCTCATGCGGAGAACACACTGAAATGTTTTTCCATGAACACTGAATACATTTCCCAATGCCAATACATACTTGATCATGCCTTGACACCCTACGCATTGATGCTTGCTAGTTCCAGTTTGTTGAAACAAGTCACGGAACACAGCCTTGCCTTGAAGCTTCGCCTTGATATATGGACATACCTCATAAACTATCTAGCGACCAGAGGACCCGAGTTACAGCCATTTGTGACTGCTTCCTTGATCCAACTTTTATGTCGAGTTACAAAGTTCGGATGGTTTGATGATGACCGATTCCGGGACCTGGTAAAAGAATCAATGAACTTCTTGAGTCAGGCAACACCAGGTCATTATGCCATTGGTTTGAAGATCCTAAGTCAGCTTATCTCTGAGATGAATCAGGCTAATGCTGGTATGCCTGCAACAATTCATCGAAGGGTTGCTTGCTCTTTTAGAGACCAATATCTTTTTCAGATATTCCAGATATCTTTAACATCATTGGGTCAACTGAAAAATGATGTGGTCAATCAAATGCAAGAATTGGCACTTGCTCTTTCTTTGAAATGTTTATCATTTGATTTTGTGGGGACATCTGTTGATGAAAGTTCGGATGAGTTTGGCACAGTTCAGATTCCATCACCTTGGAAGCCTGTTTTGGAGGAGTCTTCAACACTACAAATATTTTTTGATTACTATGGCATTACAAAGCCCCCTCTTTCAAAGGAGGCACTGGAGTGCTTGGTGCGACTAGCGTCTGTAAGACGCTCTTTGTTTACAAATGATGCTGCCCGTTCTAAATTTTTGGCCCATTTAATGACAGGAACCAAAGTAATCCTGCAAACAGGGCAAGGTCTTGCAGATCATGATAATTACCATGAGTTTTGTCGTCTTCTTGGTCGTTTCAGAGTGAATTATCAGTTGTCGGAGCTTGTTAATGTGGAAGGCTACAGCGATTGGATACGTTTGGTTGCAGAGTTTACTCTCAAATCTTTGCAATCATGGCAGTGGGCAAGCAATAGTGTGTACTACCTTTTAGGGCTGTGGTCTAGATTGGTGTCTTCTGTTCCATATTTAAAAGGTGACGCACCAAGCTTACTGGATGAATTTGTTCCCAAGATTACCGAGAATTTCATCACATCAAGATTCAATTCCGTACAGGCTGGATTGCCTGATGATCTTTCTGAGAACCCCTTAGACAATGCCGAACTTCTTCAGGATCAATTAGACTGCTTCCCGTACCTATGTAGATTTCAGTATGAAAGCAGTAGTTTATTTATAATAAACGTAATGGAGCCAGTCCTGCAAATATACACGGAAAGAGCAAGATTACATGTTCCTGATAACAGTGACCTCAGTGTGATTGAAGATAAACTTGCTTGGATTGCTCATATCATTGCCGCAATACTTAAGATAAAACAGTGTACTGGTTGTAGTTTGGAATCCCAGGAAGTGCTTGATGCTGAACTTTCTGCTCGAGTGTTGCAGTTGATAAATGTAACTGACAGTGGAATACATAGCCAGAGATATGGTGAGATAAGCAAACAAAGACTAGATAGGGCAATTCTTACTTTCTTTCAGCATTTCCGAAAGTCTTATGTAGGAGATCAGGCCATTCATTCTTCCAAGTTATATACCCGGTTATCCGAACTTCTTGGCCTACATGATCATCTATTATTGTTGAATGTTATTATTGGCAAGATTGTAACTAACCTTAAGTGCTACACAGAGAGTGAAGAGGTCATTGATCACACCTTGAGTTTGTTTTTGGAGCTTGCATCTGGCTACATGACTGGAAAGCTACTTCTGAAGTTGGACACAGTGAAATTTATTGTTGCCAATCATACGGTCCTGTTCACTGTGTGCCTTCACGCTGCCTCTATGATGTCTGTTCCTGATTTGCTTTATCCCAAGAGGGAGCATTTCCCATTTTTGGAGGCAAAAAGATGCACTCGCAGCAGAACAACATTCTATTACACTATTGGCTGGTTGATATTCATGGAAGATAGTCCCGTGAAATTTAAATCTTCAATGGATCCACTCCAACAGGTTTTTCTGAGTTTGGAATCAACCCCTGATGCAGTATTTCGAACAGATGCTGTAAGGTCTGCACTTGTTGGTTTGATGAGGGACCTTAGAGGAATTGCAATGGCCACAAACAGCCGCCGAACATATGGATTTCTCTTTGATTGGTTGTATCCTGCACACATGCCTCTACTCTTAAAGGGCATCTCACATTGGACAGACACCCCAGAGGTTACTACCCCATTGTTAAAGTTCATGGCTGAGTTTGTGCAAAATAAAGCTCAACGTTTGACTTTTGATTCTTCTTCTCCCAATGGCATCCTTCTTTTCCGGGAAGTTAGTAAACTGATTGTTGCTTATGGATCTAGAGTTCTGTCTCTTCCAAATGCTGCCGATATTTATACATACAAGTACAAAGGAATATGGATTTGTTTAACTATACTATCAAGAGCCCTTTCAGGAAATTATGTCAACTTTGGTGTGTTTGAACTATATGGTGACAGAGCTCTATCTGACGCTCTCGATGCTGCTCTAAAGATGACTTTGTCAATTCCTATGTCTGATATTTTGGCTTATAGGAAGCTAACAAGGGCTTATTTTGCATTCTTGGAGGTTTTGTTCAATAGCCACATCACATTTGTATTAAACTTGGACACAAACACCTTTATGCATATGGTTGGCTCCCTTGAATCTGGACTTAAAGGGTTGGATACAAATATCTCATCTCAGTGTGCATCTGCTGTTGATAATTTGGCTGCCTTCTATTTTAACAACATCACTATGGGGGAGGCTCCACATTTGCCTGCATCTGCCAACCTTGCTCGTCATATTGCAGAGTGTCCCAATCTGTTTCCAGAGATCTTGAAGACCCTATTTGAGATTATATTATTCGAAGACTGTGGGAACCAATGGAGTCTGAGCAGGCCAATGTTGAGCTTGATACTCATTAATGAGCAGATATTCTCTGATCTGAAAGCTCAAATCTTGTCATCACAGCCAATGGATCAGCACCAGCGGCTGTCTTCATGCTTCGACAAACTCATGGCAGATGTTACTCTAAGCATAGATTCAAAGAACAGGGACAAGTTTACTCAAAATCTCACCGTTTTTCGGCATGAATTCCGTGCCAAATAA 3219 0.4126 MELAQLEALCERLYNSQDSVERAHAENTLKCFSMNTEYISQCQYILDHALTPYALMLASSSLLKQVTEHSLALKLRLDIWTYLINYLATRGPELQPFVTASLIQLLCRVTKFGWFDDDRFRDLVKESMNFLSQATPGHYAIGLKILSQLISEMNQANAGMPATIHRRVACSFRDQYLFQIFQISLTSLGQLKNDVVNQMQELALALSLKCLSFDFVGTSVDESSDEFGTVQIPSPWKPVLEESSTLQIFFDYYGITKPPLSKEALECLVRLASVRRSLFTNDAARSKFLAHLMTGTKVILQTGQGLADHDNYHEFCRLLGRFRVNYQLSELVNVEGYSDWIRLVAEFTLKSLQSWQWASNSVYYLLGLWSRLVSSVPYLKGDAPSLLDEFVPKITENFITSRFNSVQAGLPDDLSENPLDNAELLQDQLDCFPYLCRFQYESSSLFIINVMEPVLQIYTERARLHVPDNSDLSVIEDKLAWIAHIIAAILKIKQCTGCSLESQEVLDAELSARVLQLINVTDSGIHSQRYGEISKQRLDRAILTFFQHFRKSYVGDQAIHSSKLYTRLSELLGLHDHLLLLNVIIGKIVTNLKCYTESEEVIDHTLSLFLELASGYMTGKLLLKLDTVKFIVANHTVLFTVCLHAASMMSVPDLLYPKREHFPFLEAKRCTRSRTTFYYTIGWLIFMEDSPVKFKSSMDPLQQVFLSLESTPDAVFRTDAVRSALVGLMRDLRGIAMATNSRRTYGFLFDWLYPAHMPLLLKGISHWTDTPEVTTPLLKFMAEFVQNKAQRLTFDSSSPNGILLFREVSKLIVAYGSRVLSLPNAADIYTYKYKGIWICLTILSRALSGNYVNFGVFELYGDRALSDALDAALKMTLSIPMSDILAYRKLTRAYFAFLEVLFNSHITFVLNLDTNTFMHMVGSLESGLKGLDTNISSQCASAVDNLAAFYFNNITMGEAPHLPASANLARHIAECPNLFPEILKTLFEIILFEDCGNQWSLSRPMLSLILINEQIFSDLKAQILSSQPMDQHQRLSSCFDKLMADVTLSIDSKNRDKFTQNLTVFRHEFRAK 1072
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03742 1072 Gene3D - 1 526 IPR011989 -
Vimu10g03742 1072 Coils Coil 3 23 - -
Vimu10g03742 1072 FunFam ARM repeat superfamily protein 1 529 - -
Vimu10g03742 1072 FunFam ARM repeat superfamily protein 856 1071 - -
Vimu10g03742 1072 SUPERFAMILY ARM repeat 1 1056 IPR016024 -
Vimu10g03742 1072 Gene3D - 848 1071 IPR011989 -
Vimu10g03742 1072 PANTHER EXPORTIN 4,7-RELATED 2 1070 IPR044189 GO:0005049|GO:0051169
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03742 Vimu-Chr10 46215834 46234166 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03742 K18460 - gmx:100804346 1994.16