Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03740 ATGGCATCCAACTGTGCCAATGGCTCTAATCCTTACCATCAATGCACCCAAGCTTGCTCTCAATCCACCAACCAAACCAAGATCACCACACACACAAATAAAAACAAGATTAATTCAGGTTATGGTCGAAGTGTGACAGACGGTCAGCTTGGCAAAAAGGTTGATAAGCAAAAGCGAATTTACTCAGCTTGTCCTAAAGCATCTAATCCTTACCACGAGTGTGATGACAATTGTTACAAAAGATTATCAGATTCAGGTGCCCCTCCTCCGTTAAAGTTAGACAGGAAAAATAAGCTGGGTTCTAAACCAGAACTCCCCGTTCTTGACACTGTTCCTGCCTCAAAAGTTGGAGCAATTTACCTATCCGAGAAGAAAAAGGTTTTGAGAGAGAAAAACGAGCACGTTCCCTCTGAGTCAATTTCTGGACAGAAACAAGAACCAGTTGTAAAGCCTTCCTATCTCAAAGACCAACCAAGGGATCATGTTGCCAACTCAATGACAACAACTCACGACGAAAAAAAAACATCTCGTAAAGTTGTTCCAGTAACCCACCATGTTGGCCACACTGAAGAATTGGGTCTTAATATTTCAGCTGGCGGATCCGTAGGTTCTAGTTTCTCTGGTATTCCACGTGGAAATGAAGCAAATTTAAACGATGAAGCAGAGACGGAGTCCGTGAGTTCAGAACCCCGTCTTCAAGTTGGAAGATACAAAGTAAAAGAAAGTTTTGTTTCCATTCTGCAATCTATCTTCGACAGGTACGGGGACATAGGAGCAAGTTGTCACTTGGAATCAGTGGTGATGCGCTCGTACTACGTTGAGTGTGTATGCTTTGTGGTGCAAGAGTTACACTCCTCCTCATTGATTCAACTGAGCAGCTCCAAAGTGAAGGAATTGTTGGCCATTCTTAAGGATGTGGAATCTGCTGAACTTGACGTTGCATGGTTGCGTAGCGCCCTCGACGAACTGGCCGAAAACATTGAACTCATTAATAAGCAGCAGGTGGTAGAGGCAGAAAAGGATTACTCTGGTCACGAAGTGGAGACAATAAAAGAGGAGCTACGACAAGAGTTGGAAACTTTGTCTCAGAAAGAACAAGAGGTTGCTGATATCAAAGCACGAATTCCCGAGATCAGAGGTCGTTTGAGAGAGCTCGAACTCAAGTCAGAAGAACTTAACAAAAGCATGCTATCTATCAAATCCAACGTTGATAATTTGGCCATCAAATCGTTGGTAGATGAACTGTTATGTTGA 1254 0.4306 MASNCANGSNPYHQCTQACSQSTNQTKITTHTNKNKINSGYGRSVTDGQLGKKVDKQKRIYSACPKASNPYHECDDNCYKRLSDSGAPPPLKLDRKNKLGSKPELPVLDTVPASKVGAIYLSEKKKVLREKNEHVPSESISGQKQEPVVKPSYLKDQPRDHVANSMTTTHDEKKTSRKVVPVTHHVGHTEELGLNISAGGSVGSSFSGIPRGNEANLNDEAETESVSSEPRLQVGRYKVKESFVSILQSIFDRYGDIGASCHLESVVMRSYYVECVCFVVQELHSSSLIQLSSSKVKELLAILKDVESAELDVAWLRSALDELAENIELINKQQVVEAEKDYSGHEVETIKEELRQELETLSQKEQEVADIKARIPEIRGRLRELELKSEELNKSMLSIKSNVDNLAIKSLVDELLC 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03740 417 MobiDBLite consensus disorder prediction 30 53 - -
Vimu10g03740 417 Coils Coil 306 326 - -
Vimu10g03740 417 MobiDBLite consensus disorder prediction 30 45 - -
Vimu10g03740 417 Coils Coil 344 402 - -
Vimu10g03740 417 PANTHER OS06G0711100 PROTEIN 7 416 - -
Vimu10g03740 417 MobiDBLite consensus disorder prediction 83 105 - -
Vimu10g03740 417 Pfam Arabidopsis phospholipase-like protein (PEARLI 4) 216 413 IPR007942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03740 Vimu-Chr10 46210974 46212773 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03740 - - gmx:102665955 467.618