Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03700 ATGTCTTCCATTCCGAAAGGAGGGTCTCACAAAGGAAGTTTAAAGAGTTCAGAGGCACATGCTAGTGTAGCAGAAAAGGAGGAATATCATTTCTCAAAAGCAATAGATAGGCCCAGGCCGGCTTTGAATATAGACAGACAGAGATCATGTGATGAAAGATCACTGAGTGAACTATCCGTAGGCTTTTCTCCACGTCATTTGATCTCAAAAATTGAGTTCACATCTCGCCTGGCAGAACATGTTGATCATATACATTCCCCTCTGTCAAAGTCTGGCATCAATACTCCAAGATCAGTGCCATGGGATTCACATTCATTAACATCAGAAGCTTGGGAAGCTCTGAGGCGTTCCTTGGTATATTTTCGTGGCCAGCCAGTTGGTACAATTGCTGCTTTGGATAATTCCGATGAGCAACTTAATTATGATCAGGTGTTTGTAAGAGACTTTGTCCCTAGTGCTTTGGCTTTTCTGATGCATGGTGAACCGGACATTGTTAAAAATTTTATTTTAAAGACCCTTCGCCTTCAATCGTGGGAGAAAAAGATTGACAGATTCCATCTAGCAGAAGGGGTGATGCCTGCTAGTTTTAAAGTATTCCATGATCCCGTCAGAAACCACGAAACCCTTATAGCAGATTTTGGTGAAAGTGCGATAGGAAGGGTCGCTCCTGTTGATTCTGGATTTTGGTGGATCATACTACTTCGGGCATACACAAAGTCTACGGGAGACTCTTCACTGGCCGAAGAACCTGAATGTCAAAAGGGTATGCGCTTGATCCTGAGTCTATGTCTGTCAGAGGGGTTTGACACGTTTCCAACTTTACTATGTGCTGATGGATGCTGCATGATTGATCGCAGAATGGGTGTTTATGGGTATCCAATAGAAATTCAAGCATTGTTCTTCATGGCTCTAAGATGTGCCTTGCAATTACTTAAGCCAGATGCCGAAGGGAAAGAGTTCATGGAGCGAATTGTAAAAAGGCTGCACGCCTTAAGCTATCATATGAGGAGCCACTTCTGGTTGGATCTGAAGCAACTTAATGATGTATACCGCTACAAAACAGAGGAGTACTCACATACTGCAGTGAACAAGTTCAATGTTATTCCAGAATCTTTGCCAGATTGGGTGTTCGATTTCATGCCGCATCTTGGTGGATACTTTGTTGGGAATGTGAGCCCAGCTAGGATGGATTTCCGGTGGTTTTGCCTCGGCAACTGCGTTGCAATTTTGTCGTGCATGGCAACTCCGGAGCAGTCAACTGCAATCATGGATCTCATAGAATCACGGTGGGAGGAATTGATTGGGGAGATGCCTGTGAAAGTATGTTATCCAGCTCTAGACAATCATGAATGGATGATCATAACAGGGTGTGACCCAAAAAATACTAGATGGAGTTACCATAACGGGGGATCCTGGCCAGTTCTGTTGTGGCTTCTGGCTGCTGCGTCGATAAAGACAGGGAGACCCCAGATTGCAAGACGTGCCCTTCAAATAGCTGAGAATAAATTGCTGAAGGACAACTGGCCGGAATATTACGATGGAAAGTGGGGGAGATACGTTGGGAAGCAGGCCCGTAAGTTCCAGACCTGGTCCATTGCCGGCTACTTGGCCGCTAGGATGATGCTGGATGACCCTTCCCATATAGGCCTTGTGGCTCTCGAAGAAGACAAACTACTCAAGCCTTTACTCAAGAGATCAAACTCATGGACTTTGTGA 1716 0.4499 MSSIPKGGSHKGSLKSSEAHASVAEKEEYHFSKAIDRPRPALNIDRQRSCDERSLSELSVGFSPRHLISKIEFTSRLAEHVDHIHSPLSKSGINTPRSVPWDSHSLTSEAWEALRRSLVYFRGQPVGTIAALDNSDEQLNYDQVFVRDFVPSALAFLMHGEPDIVKNFILKTLRLQSWEKKIDRFHLAEGVMPASFKVFHDPVRNHETLIADFGESAIGRVAPVDSGFWWIILLRAYTKSTGDSSLAEEPECQKGMRLILSLCLSEGFDTFPTLLCADGCCMIDRRMGVYGYPIEIQALFFMALRCALQLLKPDAEGKEFMERIVKRLHALSYHMRSHFWLDLKQLNDVYRYKTEEYSHTAVNKFNVIPESLPDWVFDFMPHLGGYFVGNVSPARMDFRWFCLGNCVAILSCMATPEQSTAIMDLIESRWEELIGEMPVKVCYPALDNHEWMIITGCDPKNTRWSYHNGGSWPVLLWLLAAASIKTGRPQIARRALQIAENKLLKDNWPEYYDGKWGRYVGKQARKFQTWSIAGYLAARMMLDDPSHIGLVALEEDKLLKPLLKRSNSWTL 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03700 571 PANTHER - 39 565 IPR024746 GO:0033926
Vimu10g03700 571 Gene3D - 132 540 IPR012341 GO:0005975
Vimu10g03700 571 FunFam probable alkaline/neutral invertase B 135 538 - -
Vimu10g03700 571 MobiDBLite consensus disorder prediction 1 30 - -
Vimu10g03700 571 Pfam Alkaline and neutral invertase 110 545 IPR024746 GO:0033926
Vimu10g03700 571 SUPERFAMILY Six-hairpin glycosidases 70 538 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03700 Vimu-Chr10 46001402 46004327 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03700 - - gmx:100796722 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03700 10 46001402 46004327 Vimu10g03700 10 46001402 46004327 ECH