Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03698 AGAACAAACCCATTTCTAACATCGTCATCATCATTGCTATGCAGACGGAGGCACTTCCCATCGTCAACAGGTTCCAGCTCACCGAGGAACCTAATTCTCCGTATGTTTCCACAGGGAGTTCCCTGGGTCCGTTATCGTGGGACATACAAAAATCTCAATTTAAGCTTGATCTGGCCTGGAAAAGATCCTGTTTTAGGAGTTGATAGCGTAGGCACAATATCATCTGCTCTTGTAACATATGCCGCTATACAAACGTTACAACCAGACCTGATCATCAATGCAGGAACTGCTGGTGGCTTTAAGGCCAAAGGAGCTAGTATTGGTGATGTGTTCGTTGTATCAGATTGTGCCTTTCACGATAGAAGAATACCCATACCCGTTTTTGATCTGTACGGTGTTGGTTTACGTAAAGCCTTTGAAGCACCCAACCTTGTAAAGGAGCTTAATCTAAAGGTGGCTAAATTGTCAACTGGTGACTCTTTAGATATGTCACAGCAGGATGAATCATCCATCATTGCAAATGATGCCACACTTAAAGATATGGAGGGAGCAGCTATTGCTTATGTTGCTGAACTTCTGAAAGTTCCTGCGGTTTTTGTAAAAGCTGTGACTGATATCATTGATGGTGACAAACCAACTGCAGAAGAATTCCTGCAAAATTTAGCAGCTGTAACTGCGAAACTTGACCTGGCAGTTGAAAAGGTTATCAATTTTATTAATGGAAAGAGCATAGCTGAACTTTGA 744 0.422 RTNPFLTSSSSLLCRRRHFPSSTGSSSPRNLILRMFPQGVPWVRYRGTYKNLNLSLIWPGKDPVLGVDSVGTISSALVTYAAIQTLQPDLIINAGTAGGFKAKGASIGDVFVVSDCAFHDRRIPIPVFDLYGVGLRKAFEAPNLVKELNLKVAKLSTGDSLDMSQQDESSIIANDATLKDMEGAAIAYVAELLKVPAVFVKAVTDIIDGDKPTAEEFLQNLAAVTAKLDLAVEKVINFINGKSIAEL 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03698 247 CDD MTAN 41 232 - -
Vimu10g03698 247 SUPERFAMILY Purine and uridine phosphorylases 41 226 IPR035994 GO:0003824|GO:0009116
Vimu10g03698 247 Gene3D Nucleoside phosphorylase domain 30 247 IPR035994 GO:0003824|GO:0009116
Vimu10g03698 247 Pfam Phosphorylase superfamily 42 236 IPR000845 GO:0003824|GO:0009116
Vimu10g03698 247 PANTHER 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE 1 35 247 IPR044580 GO:0008930|GO:0019509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03698 Vimu-Chr10 45991285 45995132 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03698 K01244 - gmx:100800253 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03698 10 45991285 45995132 Vimu10g03698 10 45991285 45995132 ECH