Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03692 ATGGGTTTCCGTTTACCTGTTATTAAACGAGCGTCTAAGGGAGCTGAAATCCCACCAAAAGGTTTTCTTGCAGTCTATGTTGGAGATAACAAGAGGCGGTTTCTGATTCCTGTATCATACTTGAACCAACCTACTTTTCAGGATTTACTGAGTCAATCAGAAGAAGAATTTGGATATTCTCATCCAACGGGTGGAGGATGTGTTCCTGCATGTCACTTCTCGCTTGAATGGGCTATAACTCATGCTAGAGAAGACTTACCAGACAACATAAATCATTCTCGTACTGAAGCATTAGAGCTAAAGGTGACTGCTTCAATCTACTACTTAGAAATCATTCTTTCCATCAGCAGGTTGTTGGAAGTTCCAAGAGGCTATCTTGCAGTGTATGTCGGAGAAAAATTGAAGCGATTCTTGATTCCAGTGTCCTTGAAGGAGCCTTTATTTCAAGAATTCCAGTGTCGCTTGTTCTCCTTTAATATTTTGCCTAAAACACAAGAAGACGCTGAAATCTAG 513 0.4055 MGFRLPVIKRASKGAEIPPKGFLAVYVGDNKRRFLIPVSYLNQPTFQDLLSQSEEEFGYSHPTGGGCVPACHFSLEWAITHAREDLPDNINHSRTEALELKVTASIYYLEIILSISRLLEVPRGYLAVYVGEKLKRFLIPVSLKEPLFQEFQCRLFSFNILPKTQEDAEI 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03692 170 Pfam Auxin responsive protein 12 72 IPR003676 GO:0009733
Vimu10g03692 170 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 14 70 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03692 Vimu-Chr10 45954171 45956748 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03692 19 70 Calmodulin-binding Proteins AT3G43120 48.077 9.93e-11 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03692 - K14488 vvo:131602130 121.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03692 10 45954171 45956748 Vimu10g03692 10 45954171 45956748 ECH