Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03689 ATGGGTTTTCGCTTACCAAGTATAAGACGATCATCATTTAGTGGAAGCCAAACATTCTCTTGCAAGGATGCAGAAGTCCCAAAAGGGTATCTTGCTGTGTATGTCGGAGAGAAAATGAAGAGGTTCTTGATACCAGTGCTGTTCTTGAACGAGCCTTTATTTCAAGAATTGCTCAGACAAGCTGAAGAGAAGTTTGGTTTCTGCCATCCCATGGGTGGTCTCACCATTCCCTGCGAGGAGACTCAACTGTTAAGCATAGCAGAGGAAGAATTTGGCTTCAGTCATCCAATGGGTGGGCTTACGATTCCATGCACAGAAGACATTTTCCTTAACATCACCTCTGTTTTTCGTATGCCATGA 360 0.4389 MGFRLPSIRRSSFSGSQTFSCKDAEVPKGYLAVYVGEKMKRFLIPVLFLNEPLFQELLRQAEEKFGFCHPMGGLTIPCEETQLLSIAEEEFGFSHPMGGLTIPCTEDIFLNITSVFRMP 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03689 119 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 82 114 IPR003676 GO:0009733
Vimu10g03689 119 Pfam Auxin responsive protein 13 81 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03689 Vimu-Chr10 45935673 45940762 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03689 25 79 Calmodulin-binding Proteins AT3G43120 61.818 9.75e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03689 - K14488 gmx:100500615 151.754
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03689 10 45935673 45940762 Vimu10g03689 10 45935673 45940762 ECH