Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03679 ATGGCATCGACGGCAGCGTACCTTGCTCGGCGCGCGGCGCAGAAGGAGAGGGTTCGGATCCTGTACCGCCGGGCCCTCAAAGACACTCTTAATTGGGCCGTGCATCGCCACCTCTTCTACAACGACGCTGAAAATCTCCGCGACAGGTTCGAGGAAAACAAACACGTGGAAGATCCTGATACAATTGATAGGCTCATAGCGGATGCTGAAGCCTCCTACAACAAATGGCGTCATCCAGATCCTTACATAGATTTATCTGCACATGTTACTCCTCTCGTTGGTCCTTCTCTTTCCTGTTTTGTTATCCAGTCCACCTCAGATATTGACCCATTTTACTCTTATTTTCTGTGTATAATAGTTCCTTGGGCGCCTGGTGGTTCCAAATTTACTCGCAACCCAGCTCCACCTCAAGGGATTGAGATCGTTTACGATTATGGCCGTGAAGATAACAACTGA 456 0.4912 MASTAAYLARRAAQKERVRILYRRALKDTLNWAVHRHLFYNDAENLRDRFEENKHVEDPDTIDRLIADAEASYNKWRHPDPYIDLSAHVTPLVGPSLSCFVIQSTSDIDPFYSYFLCIIVPWAPGGSKFTRNPAPPQGIEIVYDYGREDNN 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03679 151 CDD Complex1_LYR_NDUFB9_LYRM3 14 83 IPR045292 -
Vimu10g03679 151 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT 3 147 IPR033034 GO:0006120
Vimu10g03679 151 Pfam Complex 1 protein (LYR family) 17 70 IPR008011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03679 Vimu-Chr10 45845933 45848130 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03679 K03965 - gmx:100305723 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03679 10 45845933 45848130 Vimu10g03679 10 45845933 45848130 ECH