Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03636 ATGCCTTCAGTTGATTTCACTATATTTCGGCCATGGTACTCATCCTTTCCTAAGATGGAAAACAACATACGCCATTCTTTCATCAGTTACGTGCGTGTAAGGAGTTCTCCTGTTGTGTCCCTGAATCAGAATATTGATCCATTTATTGATAATAATTCTGATTCCATAAAATTTGAGGTCAAGGATTTTTCTTTTCTTCCTAAAATGATTTTTGAGAGACATGAAGAGAATATGTATCTTAAGCTGGTTCAAGACATCATTTCTGAAGGTACAATAAAGGGTGATAGGACAGGGACTGGTACCTTGTCAAAATTTGGTAGCCAGGTAACGTTTTTATTGGTATATTGA 348 0.3592 MPSVDFTIFRPWYSSFPKMENNIRHSFISYVRVRSSPVVSLNQNIDPFIDNNSDSIKFEVKDFSFLPKMIFERHEENMYLKLVQDIISEGTIKGDRTGTGTLSKFGSQVTFLLVY 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03636 115 PANTHER THYMIDYLATE SYNTHASE 1 22 113 IPR045097 GO:0016741
Vimu10g03636 115 SUPERFAMILY Thymidylate synthase/dCMP hydroxymethylase 54 111 IPR036926 -
Vimu10g03636 115 Gene3D Thymidylate synthase/dCMP hydroxymethylase domain 57 115 IPR036926 -
Vimu10g03636 115 Pfam Thymidylate synthase 78 112 IPR023451 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03636 Vimu-Chr10 45613929 45614276 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03636 K13998 - gmx:547833 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03636 10 45613929 45614276 Vimu10g03636 10 45613929 45614276 ECH