Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03634 ATGGAAACAGTTCAATTTATTTTCGCTAATGGCGGAGCTGGAGAAGCAAGCTATGCAAACAATTCCTCCTTTCAAAGTAAGATGATATCAAAAGTGAAACCCATCCTCGAAGAAAGTATGAAGTCCCTGTACTGCAACTCTGTCCCGAGCTGTTTCAGAGTGGCTGATCTGGGTTGTTCTTCGGGACCAAATGCACTTCAGGTGGCCTACGATATTATCGATGTTGTTCACAACATCAGTCGCAGCTATAACCGTGAGCCACCCATCACATTCCAAATTTACCTGAACGATCAATTTCAAAACGATTTCAACAACATCTTTGAGGCCCTACCTTGCTTCTACGAGAGGCTACGAGAAGAAAAGAGAGAGGGATTTGGTGCATGTTTCGTCAATGCAACGCCCGGAAGCTTTTATGGCAGACTCTTCCCGACCAATTCCATGCACTTTTTTCACTCTTCCACCAGTCTCCATTGGCTCTCTCAGACTCCGAAAGGATTGATTAACAAGGAAAACATTTACTTCACTAACACGAGCCCATGCACGGTGTACCAAGCTTACCTTGATCAGTTCAGTGAAGATTTCAATCTGTTTCTAAAATCACGAGCGGAGGAACTAGTGCATGGTGGTGGTATGGTTCTAACATTTGTTGGCAGAGATAAAACTTCCGACATAATCACTCCTTGGGGGCTAATTGGTTTGGTTCTCAATGACATGGTTTTAGAGAGTTTGATCGAAGAGGCAAAGTTGGAGTCCGTTAATATGCCAAGATATGGTCCTACTGCTGATGAAGTTAAGCAATTGATTGATGCAGAAGGGTGTTTTACTCTTCAAAAGTTGGAGACATTCAAGTCGAGATGGGATGAAGGCTTGAAAGAAAATGGTAACGGTGATTTGGCTTTAGATGTAAATGTCAGAGCCAATTTCATAGCCAAATACGTGAGAGCTACTACTGAACCTTTTCTGACTTCACGGTTTGGAGAAGGTATAATCGATGAATTATTCCTTAGATTCGGAAAGAAGGTTGGCAAACTGTTGGAGGAACAAAAATTAGAGTATACTTATCTGGTCATGTTCATGACAAAAAAGTGA 1089 0.4206 METVQFIFANGGAGEASYANNSSFQSKMISKVKPILEESMKSLYCNSVPSCFRVADLGCSSGPNALQVAYDIIDVVHNISRSYNREPPITFQIYLNDQFQNDFNNIFEALPCFYERLREEKREGFGACFVNATPGSFYGRLFPTNSMHFFHSSTSLHWLSQTPKGLINKENIYFTNTSPCTVYQAYLDQFSEDFNLFLKSRAEELVHGGGMVLTFVGRDKTSDIITPWGLIGLVLNDMVLESLIEEAKLESVNMPRYGPTADEVKQLIDAEGCFTLQKLETFKSRWDEGLKENGNGDLALDVNVRANFIAKYVRATTEPFLTSRFGEGIIDELFLRFGKKVGKLLEEQKLEYTYLVMFMTKK 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03634 362 Gene3D - 9 348 IPR042086 -
Vimu10g03634 362 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 10 343 IPR005299 GO:0008168
Vimu10g03634 362 Pfam SAM dependent carboxyl methyltransferase 39 361 IPR005299 GO:0008168
Vimu10g03634 362 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 362 IPR029063 -
Vimu10g03634 362 Gene3D Vaccinia Virus protein VP39 21 349 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03634 Vimu-Chr10 45607446 45609197 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03634 - K21483 vun:114164464 620.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03634 10 45607446 45609197 Vimu10g03634 10 45607446 45609197 ECH