Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03624 ATGCAATCTGTGAAAATAGCGGAAGTGTTGAACGTCTCGGAAGGTGGGTTAGAAGACAAGGGAAAGAACCTCATTTCAAGCCTCGACAATGGTGATAGCCAACACGTGCAGATTGATTCTGGCACTGCCCTTCAACAATTTCTTGATCGCATACCCATTAGTTCGATACCTGGCATAAAAAACTCACCTGTTTTGGAATTGAAAGCCGGAGACAGTATAAGGGATGCAATTCATACGTTGCACGAAAAGGACGTCTTTTCTGCGGCAATTGTTGACATGTTGGACTCCGATGCGGATAACATAATGTTTTCAGATCAGTACATTGGTCTCGTTGATTTTACAAGCATGGTTCTTTGGTGCCTTGAGGAATATGAAAAGACCACCGACAATCTCGAATATATCAAGCACTGTGGCTTTTTCTCCGTCCTGGACCATATTCCTCAGATTGGGCAAACCAAGATTAGCGAGCTGGCAATGTCATTCCTCTGGGAACCATTTTTCCCCGTAACCTTGGATGATACAGTCTTTCATGCACTGCTACTTCTCTCTAAGCATCGGGTGCACGTTTTGCCGGTCATACAGCAACGTGAAGATGGACTCATCGGTTTTGTTACGCAGAATGCAGTAGTCCAACACCTTCTTCAATCAAGTGAGCTAGAGTGGTTTGATAGCATTGCAGACAAGAACTTGTCAGATTTGCGATTTGAAGGCCTAGAAAATCCTAGTTGTGTATTTTCGGACCAAACTGTCGCAGATGCTTTAAAGACGTTCTGGCAAAACCAAACTAGTGCAGTAGCTGTTGTAGATCGACAAACTAAGAAGCTCCTTGGTAATGTGAGGAAAAGTGATGTTCATATTCTTGTAAGGAATGATGACATCTTTAGAAGTAGAACGGTTTTAACTGTGGGGGAATTCATTCACATGGAGACTGACAAAGCTGAAAGTAAGCCAAGCATTGAACGTGATCATGCGGCTTTTCTCACAGCAGGAAGTCTTCGGCTGAAAAACAGCTTCATACCCAGAATGGACTTCCCAGTTGCCTGCAAGGAAAATGCAACGCTGAAGCAAATAATGGAGCATACCACAGCGACTAACAGCAGTTTCAGCTTTCTGGTCAATGATAAGGAGCAAGTTACAGGTTTTCTCACATTGAGGGATATAATTCTGCAGTTTGCCCCACCATGTGTTAATTCTACCATTAATGGAGGTGGTTTTTTTGAATTTGCCTTGGAGCAAAGTGGATGTCAAGTTAAAGATGGAACAATGATTCGTAATCACTGA 1281 0.4294 MQSVKIAEVLNVSEGGLEDKGKNLISSLDNGDSQHVQIDSGTALQQFLDRIPISSIPGIKNSPVLELKAGDSIRDAIHTLHEKDVFSAAIVDMLDSDADNIMFSDQYIGLVDFTSMVLWCLEEYEKTTDNLEYIKHCGFFSVLDHIPQIGQTKISELAMSFLWEPFFPVTLDDTVFHALLLLSKHRVHVLPVIQQREDGLIGFVTQNAVVQHLLQSSELEWFDSIADKNLSDLRFEGLENPSCVFSDQTVADALKTFWQNQTSAVAVVDRQTKKLLGNVRKSDVHILVRNDDIFRSRTVLTVGEFIHMETDKAESKPSIERDHAAFLTAGSLRLKNSFIPRMDFPVACKENATLKQIMEHTTATNSSFSFLVNDKEQVTGFLTLRDIILQFAPPCVNSTINGGGFFEFALEQSGCQVKDGTMIRNH 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03624 426 CDD CBS_pair_SF 164 284 - -
Vimu10g03624 426 Gene3D - 36 219 IPR046342 -
Vimu10g03624 426 SMART cbs_1 240 289 IPR000644 -
Vimu10g03624 426 SMART cbs_1 165 214 IPR000644 -
Vimu10g03624 426 SMART cbs_1 344 392 IPR000644 -
Vimu10g03624 426 Pfam CBS domain 162 213 IPR000644 -
Vimu10g03624 426 Pfam CBS domain 345 388 IPR000644 -
Vimu10g03624 426 SUPERFAMILY CBS-domain pair 43 214 IPR046342 -
Vimu10g03624 426 PANTHER AMP-ACTIVATED PROTEIN KINASE, GAMMA REGULATORY SUBUNIT 61 391 - -
Vimu10g03624 426 ProSiteProfiles CBS domain profile. 159 219 IPR000644 -
Vimu10g03624 426 Gene3D - 223 392 IPR046342 -
Vimu10g03624 426 SUPERFAMILY CBS-domain pair 239 388 IPR046342 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03624 - - gmx:100819351 637.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03624 10 45570181 45572032 Vimu10g03624 10 45570181 45572032 ECH