Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03609 ATGTCTCTGCTCCTTTTCTCATACAAGCTTGAAAGAAGAACCAGAATTTTCAAGGAAAAACAAAAAATGAGACTTGGATTTGCTTCTTGGAGCTTCATCCTATGCACCCTAGTCATCTTTTTGATTCTGCAAGAGGGTGGAGCTAGAAAGATATCCACAACATCTAGCAGACAGATTGAACTGAAGGAAGCATCCTATAATTTGCAGAAGTTTGCTACAGAGGGTCTTGTACTTGATAGCATTATTCAGCTTGAAGGCGCTGATATAAACTTGAAGAAGAAGAAGCATGTCCATGATGAGGGCGAGGATGAAGATGATGATGACGACAAGAAGAAGGAGAAGGAGAAGAAATATAAAAGCGAAAAGATCATTGAAAGTGATAATCACAAACACATGGACCCTGAACTGAATGTGTTTTTCACCCCAGATGATATGAAGGTTGGGAAAATCATGCCTATCTACTTTTCAAAGAAAAACTCTTCAAAGTCTCCAAAATTTTTGAGCAGAGAAGAATCTGACAAGGTTCCCTTCTCCTCAAAACACCTACCATACCTTCTCAAATTCTTCTCCATCCCAAAACACTCACCCCAAGCCAAGGCCATGGAGTATACACTCAAACAATGCGAATTCGAAAACATGGAAGGAGAAACCAAGTTCTGTGCCACATCCCTTGAGTCCTTGTTTGATTTTGCACACTATCTGTTTGGGTCAAATACACAGTTCAAAGTTCTGACCACTGTTCATCTCACAAACTCAACAGCTGTTTTACAGAACTATACCATATCAGAAGTGAAAGTGATTTCGGTTCCAAACGTTATAGGGTGTCACCCTATGCCTTACCCTTATGCAGTTTTTTACTGCCACAGTCAGCAGAGTGACACCCGTCTCTATGAGGTGTTGGTGAAGGGTGAAAATGGAGGAAGAGTTCAAGCTGCAGCTATTTGCCACATGGACACCTCTAAGTGGGACCGAGACCACGTGTCCTTTCGTGTTCTCAAAGTTGAGCATGGAACCTCCCCTGTTTGCCATTTCTTCCCTTCTGATAATCTAGTCTGGGTACCTTTATCCGTGGCTCCATAA 1080 0.4185 MSLLLFSYKLERRTRIFKEKQKMRLGFASWSFILCTLVIFLILQEGGARKISTTSSRQIELKEASYNLQKFATEGLVLDSIIQLEGADINLKKKKHVHDEGEDEDDDDDKKKEKEKKYKSEKIIESDNHKHMDPELNVFFTPDDMKVGKIMPIYFSKKNSSKSPKFLSREESDKVPFSSKHLPYLLKFFSIPKHSPQAKAMEYTLKQCEFENMEGETKFCATSLESLFDFAHYLFGSNTQFKVLTTVHLTNSTAVLQNYTISEVKVISVPNVIGCHPMPYPYAVFYCHSQQSDTRLYEVLVKGENGGRVQAAAICHMDTSKWDRDHVSFRVLKVEHGTSPVCHFFPSDNLVWVPLSVAP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03609 359 Pfam BURP domain 138 354 IPR004873 -
Vimu10g03609 359 SMART BURP_2 137 355 IPR004873 -
Vimu10g03609 359 MobiDBLite consensus disorder prediction 93 126 - -
Vimu10g03609 359 MobiDBLite consensus disorder prediction 109 126 - -
Vimu10g03609 359 ProSiteProfiles BURP domain profile. 139 355 IPR004873 -
Vimu10g03609 359 PANTHER BURP DOMAIN PROTEIN USPL1-LIKE 102 354 IPR044816 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03609 Vimu-Chr10 45462327 45463855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03609 - - gmx:100806829 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03609 10 45462327 45463855 Vimu10g03609 10 45462327 45463855 ECH