Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03563 ATGCGGCGGAGACCCCGCACCACCTTCATTGTCTCCATACTCTCCATTATCACCTTCGCTTCGTTCTCTCTTTATTTCTCTCGCAATGCCATTTCCACTTGGCAACCTTACTCCGACATCCCAAAAACAAAAGCCTTTCTTCTTAACACCACCTCCAACACCAACAACAACAATGTCGTCCAGAGTAACAACGTTAACCAACTCACCCGCCAAACACGTCGTGTATCCTCTGTCAAGGACTCCTTATCCACCGTCTCCGTTCTCATCCCCGATTGGGAGATTCTCGTCATCGTTGTCGTAAACACGCCTTTTTCCTCCTCCCAGCAATACCATTGCCTCTTCCCCGACAAGGCCAGGTCTTTGGCAAGATTCTCCGGCGTCTTACCTTACACCAATCGAGCCACCTTCAAGTGCGACATGCCGGAATCCGTCCGGCGACATCGCATGTTCTCCCAGCCTACGCTTGTGACGGGAACATCGGAGACGGAGTTGCTGAAACCAATGCCTCAACTCATGAAGTGGAACTTTCTCGTGTTCGAGTCTTTCTCCACGGAAAATGATGTTGTTGTTTTCGCCAAAGGGGTTAACCATCGCAATGGATACGACAGGTCTCCGGGGGAACTCCGCTGCGTTTTTGACTTTGGAAATGGAGTTCGTACCGCCGTCACGAGCTCCGTCCAAGAAGTGTTTCGTTGCCCCCACCCAGACTTTGAGCCGGTTTTGGATTCTTATTATGGGTTGCCCCAGAGAATCGGAATCTCCCTTGAGATCGTTGCGGAAAACACCGTTGTCCCTTCGGTGGCGTATTACATTCCTAGCTCTAAGCCCAAGCTCGACGCCGTCGCTGCACAAGGAGACTCGGTGCAGGCACAACCCAAATATGTCTTATGTGCCTGCACCATGGTTCACAACGTGGCAAAATTCTTACGAGAATGGGTTATGTATCATTCGAAAGTTGGTGTGGATAATTTCATCTTATACGACAATGGAAGCGATGATGATTTGTACAGTTTGATCAGGGAGCTCCGACAAGAAGGGTACAACATTAGCACTGTGTTTTGGATCTGGCCAAAGACTCAAGAAGCCGGGTTTTCCCACAGTGTCGTGTACTCGAAATCAAAGGGACTGTGTAAATGGATTATGTACGTGGATGTTGACGAGTTCGTGTTTTCTCCCTCTTGGGGACATGAAAGCAACCCTTCGTTAAAATCATTGCTACCACACAAACAGCCATTAGAAGAAGGAACAAGGAACAAGGTGGGACAAGTGTCGATGAAATGTTTGGAATTTGGGCCTTCGGGTCGACGAAGACACCCAGAGGAAGGTGTGACGCAGGGGTACACGTGTCGGATGAGGGCGGAGCAGAGGCACAAATCGATGGTGATGGTGGATGCGGTGGACCCCAGTTTGCGGAACGTGATACACCATTTTTATGTGAACGAAAAGGAGGGGTTCGTGTCGAAGCAGGTTAGCTTGGAAGAGGGTTTGGTGAATCACTACAAGTATCAAGCATGGGATGAGTTCAAGAACAAGTTCCGAAGGAGGGTTTCTGCTTATGTTGTCGATTGGAAGCAAGAGTTGAACCCAACCTCAAAGGATAGAACTCCTGGGTTGGGATTCAAACCCATAGAACCCGAAGATTGGACACAGAGATTCTGTGAAGTTACAGACCTGAGGTTGAAGTTCTTGACCCGAAAATGGTTCCGGTTGCTCACGCCCAACGGCTACAGAATGGCATGGCAAAAACGATGA 1752 0.492 MRRRPRTTFIVSILSIITFASFSLYFSRNAISTWQPYSDIPKTKAFLLNTTSNTNNNNVVQSNNVNQLTRQTRRVSSVKDSLSTVSVLIPDWEILVIVVVNTPFSSSQQYHCLFPDKARSLARFSGVLPYTNRATFKCDMPESVRRHRMFSQPTLVTGTSETELLKPMPQLMKWNFLVFESFSTENDVVVFAKGVNHRNGYDRSPGELRCVFDFGNGVRTAVTSSVQEVFRCPHPDFEPVLDSYYGLPQRIGISLEIVAENTVVPSVAYYIPSSKPKLDAVAAQGDSVQAQPKYVLCACTMVHNVAKFLREWVMYHSKVGVDNFILYDNGSDDDLYSLIRELRQEGYNISTVFWIWPKTQEAGFSHSVVYSKSKGLCKWIMYVDVDEFVFSPSWGHESNPSLKSLLPHKQPLEEGTRNKVGQVSMKCLEFGPSGRRRHPEEGVTQGYTCRMRAEQRHKSMVMVDAVDPSLRNVIHHFYVNEKEGFVSKQVSLEEGLVNHYKYQAWDEFKNKFRRRVSAYVVDWKQELNPTSKDRTPGLGFKPIEPEDWTQRFCEVTDLRLKFLTRKWFRLLTPNGYRMAWQKR 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03563 583 CDD Glyco_tranf_GTA_type 302 394 - -
Vimu10g03563 583 PANTHER UNCHARACTERIZED 21 570 - -
Vimu10g03563 583 SUPERFAMILY Nucleotide-diphospho-sugar transferases 296 394 IPR029044 -
Vimu10g03563 583 Pfam Glycosyltransferase family 92 293 522 IPR008166 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03563 Vimu-Chr10 45166329 45168390 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03563 - - vum:124830333 1132.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03563 10 45166329 45168390 Vimu10g03563 10 45166329 45168390 ECH