Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03527 ATGGAGAAATTATATGGCCTGAGTCATCTCTTCATGACAGTGTTTCTTCACAACTTTGCCATATTCATGGTGGTGCCAGCCATCACTGATGTAACAATGGCTGCTCTTTGTCCTGGACAAGATGAATGCTCGCTTGCCATCTACCTCACTGGTTTTCAACAAGCGATGATTGGAGTGGGCACGCTCGTGATGATGCCGCTGTTAGGTAATCTCTCTGATAAGTATGGGAGGAAGGCCATTCTCACAGTTCCTATGATCCTCACGATCATTCCCACAGGCATATTAGCTTACAACAGGACCAAAAAATTCTTCTATGTGTACTATGTGTTCAAAATACTCATTTCGATGGTTTGCGAAGGAAGCGTCCCTTGCCTCGCTCTAGCTTATGTGGCAGATAACATTCCAGAAAGTGGAAGAAGCACTGCATTTGGCATTATTTCAGGGATAGGATCTGCCGCGTTTGTGTGTGCCACTTTATCAGCTCGATTCTTATCCACTGCCCAAACTTTTCAGGTTTCTACTCTTATTGCTGTGATTGGAGCAATGTACATGCAATTTTTTCTTCGAGATTCAGTCATTGATGACAGACACCTTTACACCCCAATCATTTCACAAGAAAAGCCTACAGTTTCTAAGGTCGATGCAGAATTGGAAAGTAACAAGCATCTTCTTAAAGCACTGCGTTCTTTCAAGGACCTAACCTCCTTCCTCGGTAGCAGCTTCACTATTACACAAGCAGCAATTGTTGCATTCTTTAGTAACCTTGCTGATGTTGGCCTTCATGGATCAATGCTGTATTTCTTAAAGGCTCAATTTCATTTTGATAAGAATCAATTTGCTGACTTGATGGTCATTTCTGGAATTTCAGGGACTGTGTCACAGGTTCCTTATGCTTCTGCCATGTTCTCAATTTTATTTGTTTTCTCACAACCTTGTATACGAAGTATTGTGTCTAAACAAGTTGGTCCCCATGAGCAGGGAAAGGCTCAAGGTTGCATCTCTGGCATATGTTCAGTTGCACATATAGTTTCTCCCTTAGTTTTCTCTCCATTAACAGCTCTCTTCCTTTCTGAAAAGGCACCTTTCGATTTTCCCGGATTTAGTATAATGTGCATTGGCTTTGCTTCGGTAAGAACTTAA 1140 0.4193 MEKLYGLSHLFMTVFLHNFAIFMVVPAITDVTMAALCPGQDECSLAIYLTGFQQAMIGVGTLVMMPLLGNLSDKYGRKAILTVPMILTIIPTGILAYNRTKKFFYVYYVFKILISMVCEGSVPCLALAYVADNIPESGRSTAFGIISGIGSAAFVCATLSARFLSTAQTFQVSTLIAVIGAMYMQFFLRDSVIDDRHLYTPIISQEKPTVSKVDAELESNKHLLKALRSFKDLTSFLGSSFTITQAAIVAFFSNLADVGLHGSMLYFLKAQFHFDKNQFADLMVISGISGTVSQVPYASAMFSILFVFSQPCIRSIVSKQVGPHEQGKAQGCISGICSVAHIVSPLVFSPLTALFLSEKAPFDFPGFSIMCIGFASVRT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03527 379 CDD MFS_SLC46_TetA_like 10 373 - -
Vimu10g03527 379 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 192 IPR020846 GO:0022857
Vimu10g03527 379 Pfam Major Facilitator Superfamily 10 372 IPR011701 GO:0022857|GO:0055085
Vimu10g03527 379 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 295 371 - -
Vimu10g03527 379 Gene3D MFS general substrate transporter like domains 7 377 IPR036259 -
Vimu10g03527 379 SUPERFAMILY MFS general substrate transporter 10 355 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03527 Vimu-Chr10 44870835 44876489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03527 2 367 Organic Solute Cotransporters AT2G16990 43.133 1.73e-96 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03527 - - gmx:100799551 664.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03527 10 44870835 44876489 Vimu10g03527 10 44870835 44876489 ECH