Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03525 ATGGACTCTTTCTCTCTCCTCTGCACCGGAGCGCTCCTCGCCGGCGGCCTCTACTGGTTCGTGTGCGTACTGGGCCCCGCCGAGCAGAAGGGAAAGCGCGCCACGGATCTGTCTGGCGGTTCCATTTCGGCGGAGAAAGTCCAGGACAACTACAAGCAGTACTGGTCGTTCTTCCGCCGCCCGAAGGAGATCGAAACGGCCGAGAAAGTCCCGGACTTCGTGGACACCTTCTACAATTTAGTGACCGACATCTATGAGTGGGGATGGGGTCAGTCCTTCCATTTCTCCCCCTCGATCCCCGGCAAGTCCCACCATGAAGCCACGCGCCTCCACGAGGAGATGGCAGTGGATCTCATCCAGGCCGGCCCAGGAGACAGAGTCCTGGACGTGGGCTGCGGCGTGGGCGGGCCAATGCGCGCCATCGCAGCCCACTCCCGCGCTAACGTTGTGGGAATCACAATCAACGACTATCAGGTGAATCGCGCCCGCCTCCACAACAAGAAAGCCGGTCTGGACTCCCTCTGCGAGGTCGTCTGCGGTAATTTCCTCAACATGCCCTTCCCCGACAACTCCTTCGACGGCGCATATTCCATCGAAGCCACGTGTCATGCTCCCAAGCTCGAACAGGTCTACGCTGAAATCTTCCGTGTGTTGAAACCGGGTGCGCTCTACGTATCGTATGAGTGGGTCACCACAGACAAGTACCGCGCCGATGACCCAGAACATGTGGAGGTCATCCAGGGCATTGAGAGGGGTGACGCCTTGCCTGGTCTCAGAAGCCACACTGACATAGCCGAAACTGCGCGTAAGGTTGGGTTCGTCGTGGTTAAGGAACAGGATCTGGCTAAGCCGCCGGCTCAACCCTGGTGGAGCCGCCTGAAAATGGGCCGGATCGCCTACTGGCGAAACCACATCGTGGTCACCGTTCTTGCTGCCTTGGGAATAGCACCCAAGGGGACCGTGGACGTCCACGAGATGCTTTTCAAGACAGCTGATTATTTGACCAGAGGGGGCGACTCTGGGATTTTCTCCCCGATGCACATGATCCTCTGCAGAAAGCCCCACGACAGTGACGACCAAGTCCAAACCTGA 1092 0.587 MDSFSLLCTGALLAGGLYWFVCVLGPAEQKGKRATDLSGGSISAEKVQDNYKQYWSFFRRPKEIETAEKVPDFVDTFYNLVTDIYEWGWGQSFHFSPSIPGKSHHEATRLHEEMAVDLIQAGPGDRVLDVGCGVGGPMRAIAAHSRANVVGITINDYQVNRARLHNKKAGLDSLCEVVCGNFLNMPFPDNSFDGAYSIEATCHAPKLEQVYAEIFRVLKPGALYVSYEWVTTDKYRADDPEHVEVIQGIERGDALPGLRSHTDIAETARKVGFVVVKEQDLAKPPAQPWWSRLKMGRIAYWRNHIVVTVLAALGIAPKGTVDVHEMLFKTADYLTRGGDSGIFSPMHMILCRKPHDSDDQVQT 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03525 363 PANTHER - 1 357 - -
Vimu10g03525 363 FunFam Methyltransferase 44 305 - -
Vimu10g03525 363 Pfam Sterol methyltransferase C-terminal 291 354 IPR013705 GO:0006694|GO:0008168
Vimu10g03525 363 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 77 355 IPR029063 -
Vimu10g03525 363 ProSiteProfiles SAM-dependent methyltransferase Erg6/SMT-type domain profile. 77 354 IPR030384 GO:0008168
Vimu10g03525 363 Gene3D Vaccinia Virus protein VP39 44 309 IPR029063 -
Vimu10g03525 363 Pfam Methyltransferase domain 128 224 IPR013216 GO:0008168
Vimu10g03525 363 CDD AdoMet_MTases 126 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03525 Vimu-Chr10 44858083 44862170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03525 116 222 Acyl Lipid Metabolism Gene Families AT1G73600 32.710 2.22e-11 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03525 K08242 - gmx:100804517 710.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03525 10 44858083 44862170 Vimu10g03525 10 44858083 44862170 ECH