Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03476 TTGCTGACTCCTTATTTTTCTTTACTTTCCTTTTTCTGCCTAATATTATTATTCTGTGTTCTTCTTGCTGTATTCATGGAAGCCCAACAGCAACAATCAGCCAGCAAGTCTAGGTTCAGACGCATCTGTGTTTACTGCGGTAGCAGCCCTGGCAAAAGCCCCAGCTACCAGCTCGCTGCTGTTCAACTCGGAAAACAACTGGTGGAGAGGAAGATTGACTTGGTGTATGGAGGAGGAAGCATAGGTTTGATGGGTCTAATCTCACAAGTTGTATACGATGGTGGACGCCACGTGTTAGGGGTCATTCCAAACACACTTAATGCAAGAGAGATCACCGGCGAGAGTGTAGGAGAAGTCAGAGCTGTATCCGGCATGCACCAACGCAAAGCAGAGATGGCCCGACAGGCCGATGCATTCATTGCACTCCCAGGTGGATATGGCACCCTTGAAGAACTACTGGAAATTATCACCTGGGCTCAGTTAGGTATCCATGATAAACCGGTGGGGTTGTTGAACGTGGATGGGTACTACAACTCGCTGCTGGCATTCATGGACAAAGCTGTGGACGAAGGTTTCGTAACACCTGCTGCCCGTCACATTATTGTTTCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTCCCCGAGCACAGTGGCGTGGCCCCCAAGCTAAGTTGGGAGATGGAGCAACAGTTAGTTAACACTGCAAAGTCAGATATTTCCCGTTGA 741 0.4858 MLTPYFSLLSFFCLILLFCVLLAVFMEAQQQQSASKSRFRRICVYCGSSPGKSPSYQLAAVQLGKQLVERKIDLVYGGGSIGLMGLISQVVYDGGRHVLGVIPNTLNAREITGESVGEVRAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHSGVAPKLSWEMEQQLVNTAKSDISR 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03476 246 FunFam CASP-like protein 29 216 - -
Vimu10g03476 246 PANTHER LOG FAMILY PROTEIN YJL055W 31 236 - -
Vimu10g03476 246 Pfam Possible lysine decarboxylase 84 213 IPR031100 -
Vimu10g03476 246 Gene3D - 28 216 - -
Vimu10g03476 246 NCBIfam Rossman fold protein, TIGR00730 family 41 217 IPR005269 GO:0009691|GO:0016787
Vimu10g03476 246 SUPERFAMILY MCP/YpsA-like 38 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03476 Vimu-Chr10 44499969 44501940 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03476 K22522 - gmx:100782787 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03476 10 44499969 44501940 Vimu10g03476 10 44499969 44501940 ECH