Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03472 ATGGCAATAATGTCAGAAGGGGGACTTGCAAAATGTACCAGAATCCGGCACATCGTCAGGCTCCGCCAAATGCTGCGGCGCTGGCGTAGCAAGGCTCGCATGTCGGCCCACCGAGAAGTACCCTCCGATGTTCCGGCGGGACACGTGGCGGTGTGCGTGGGCACCAACTCCAGGAGATTTGTGGTGCGCGCCACCTACCTGAACCACCCCGTGTTTACGAAGCTACTTGTAGAGGCGGAGGAAGAGTACGGATTCTCCAACCACGGTCCTCTCACCATTCCCTGCGACGAAACACTCTTCGAACAGCTCCTCCGCTTCATTTCACGCTCTCATTCCCCTCCCTCCAACCGCTTCGACGACTGTCACGTCCCTCTCATAAACAACCTCGACTTCTGCCTCCAATCTCGACCAATACTCCACTGA 423 0.5697 MAIMSEGGLAKCTRIRHIVRLRQMLRRWRSKARMSAHREVPSDVPAGHVAVCVGTNSRRFVVRATYLNHPVFTKLLVEAEEEYGFSNHGPLTIPCDETLFEQLLRFISRSHSPPSNRFDDCHVPLINNLDFCLQSRPILH 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03472 140 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 30 103 IPR003676 GO:0009733
Vimu10g03472 140 Pfam Auxin responsive protein 20 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03472 Vimu-Chr10 44458413 44460032 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03472 9 139 Calmodulin-binding Proteins AT4G34750 48.611 3.30e-42 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03472 K14488 - gmx:100794795 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03472 10 44458413 44460032 Vimu10g03472 10 44458413 44460032 ECH