Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03470 ATGTTGAAGTTCCTGTCGAGAGTGAAAATTGAGTTCAACGCGCTGGATCCGCGAACGGCGTCGTGTATGGAGTTTCTGGCGCAATGCAACTCGCGTAAGGCGAAGGAATCGAACCCGGCGTGCGAAGTGGAGGTAAAGCGCGGCAAGGTAGAGTGCGCGCCGCAGATAACAGTGACATTCGTGAACGGCGTGGAGGAAGTGTTCGACGCGACGGCGACACCGGCACAGAACATAAGAAACTTGATTCTGGAAAAGGGTCGGCAGCTCGAGACGGAGCAGATGTTCCGTGAAGCCGGAGAATCCTGGCCCGTTATCATCCCCGAGGAGGAGCTTTCTCAGATTGCACCCCCTACCAAAGTGAGTTCTCATTTTCAACTTTATTTATTGGGCCTGTTATATTTTTACTCTTAA 411 0.5207 MLKFLSRVKIEFNALDPRTASCMEFLAQCNSRKAKESNPACEVEVKRGKVECAPQITVTFVNGVEEVFDATATPAQNIRNLILEKGRQLETEQMFREAGESWPVIIPEEELSQIAPPTKVSSHFQLYLLGLLYFYS 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03470 136 PANTHER 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL 1 122 - -
Vimu10g03470 136 Pfam 39S ribosomal protein L53/MRP-L53 12 63 IPR019716 -
Vimu10g03470 136 Gene3D Glutaredoxin 1 101 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03470 K17434 - gmx:100788686 219.164
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03470 10 44446776 44447186 Vimu10g03470 10 44446776 44447186 ECH