Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03448 ATGGCAACCCAAGGTTCGCGATTTCAGATTGAACTTGTGGTAGACACGACCACGACAACCTCAAACGTTTGTAGCCACAACGACAGTTTCAGCAATCACCAACATTCAACCTCTTTCACAAAGCTCCTAATGTCTGTTCTAAGAAGATTCCATGCAGGCTACTTCAGAATAAGCCTCTCCCTCGGAAGCCAAGCATTACTGTGGAAGACGATAATCACATCAGAACAAGACACAACCACTCTACCGCACGTGCTTTCCACGCTTCCTTCAGTGGCTGTCTATGCACTCTGGTCTTTATCCCTTTTCACTCTAGTGTTACTCTCCCTTCTCTACCTCCTAAGATGCTTTTTTTTCTTTAAGATGGTGAAGGCCGAGTTCTTGCACCATGTGGGAGTTAACTACTTCTTCGCCCCCTGGATTTCGTGGCTTCTCTTGCTTCAATCAGCGCCGTTCGTTGCGCCCAAAACCACCTTGTACATGGTTCTGTGGTGGGTGTTTGCGGTGCCGGTGGTGGTGCTTGACGTGAAGATCTACGGACAGTGGTTGACGAAGGGGAAGAGGATTTTATCCTCTGCGGCGGGGAATCCGACGAGCCAGATGTCAGTGATAGGGAACTTGGTTGGAGCACAGGCTGCTGCGAACATGGGATGGAAAGAGTGTGCGTTGTGGTTGTTTTCGGTGGGGATAGTACATTACTTGGTGCTGTTTGTTACGCTATATCAGCGATTATCGGGTAGAGATGGGGTTCCAGTGTTGTTAAGGCCAGTCTTGTTCTTGTTCATTGCAGCGCCTAGCGTAGCAAGCTTGGCTTGGGAATCCATTATTTGCAGGCCAAACCTGTTCAGGAGATCAATGAGAAGGTTCAACGTTGCATGGTGGGATTACTCATTTCCCATTACTGCATTTGCTCTTGTTTCAACGGATTATGCAGAAGAAATGAAAGGAACTTTTTCTCACATCCTAATGCTCCTTCTGTTGGCTCTTTCAGTTCTTGTCTCTCTTGCTCTCACCATGTTTACTCTCCTCAACTCTAACATGCTTCTACTGGATATATATCCTTCCAAGCTTCCTCAGTTAATCCTTCTAATGAATTCCCTGCTGCGTCACAGAAATTCTACTCTTGCGAAAGTGTTGGACAACGTCGGCATGGCAACCCAAGGTTCCCGATCCCAGATTGAACTTGTAGTAGACACGACCACGACCACCTCAACCGTTTCTAGCCACACCAACAGTTTTAGCAACTACCAACACTCAACCTCTTTCACAACGCTCCTAATCTCTGTTCTGACCAAGTTGCATGCAGGCTACTTCAGAATAAGCCTCTCCCTCGGAAGCCAAGCATTACTGTGGAAGACGATAATCACATCGGAACAAGACACAACCACTCTACCGCACGTGCTTTCCAGGCTTCCTTCAGCGGCTGTCTATGCACTCTGGTCTTTATCCCTTTTCACTCTATTGTTACTCTCCCTTCTCTACCTCCTAAGATGCTTTTTTTTCTTTAAGATGGTGAAGGCCGAGTTCTTGCACCCTGTAGGAGTTAACTACCTCTTCGCCCCCTGGATTTCGTGGCTTCTCTTGCTTGAATCAGCGCCGTTCGTGGCTCCCAAAACCACTTTGTACTTTGTTATGTGGTGGGTGTTTGCGGTCCCGATGATGGTGCTTGACGTGAAGATCTACGGGCAGTGGTTGACGAAGGGGAAGAGGGTTTTGTCCTCTGCGGCGGGGAACCCCACGAGCCAATTGTCGGTGATAGGGAACTTGGTGGGGGCACAAGCTGCTGCGCACATGGGGTGGAAAGAGTGTGCGCTGTGGTTGTTTTCGGTGGGGATGGTGCATTACGTGGTGCTTTTTGTTACGCTTTATCAGCGATTATCGGGTAGAGATGGGGTTCCAGTGTTGTTAAGGCCAGTTTTGTTCTTGTTCATTGCAGCGCCCAGTGTCGCAAGCTTGGCTTGGGAATCCATTGTTGGAACCTTTGACACTGCTTCCAAGATGCTCTTTTTTCTTTCCCTCTTCCTCTTCGCCTCACTGGCCAAGACTGTTCAGAAGATCAATGAAAAGGTTCAACGTTGCATGGTGGGCTTACTCATTTCCGATTACTGCACTTGCTCTTGTTTCAACGGATTATGCAGAAGAAGTGAAAGGAACTTTTTCTCACATCCTAATGCTCCTTCTGTTGGCTCTTTCAGTTCTCGTCTCTCTTGCTCTCACCATGTTTACTCTCCTCAACTCTAA 2238 0.479 MATQGSRFQIELVVDTTTTTSNVCSHNDSFSNHQHSTSFTKLLMSVLRRFHAGYFRISLSLGSQALLWKTIITSEQDTTTLPHVLSTLPSVAVYALWSLSLFTLVLLSLLYLLRCFFFFKMVKAEFLHHVGVNYFFAPWISWLLLLQSAPFVAPKTTLYMVLWWVFAVPVVVLDVKIYGQWLTKGKRILSSAAGNPTSQMSVIGNLVGAQAAANMGWKECALWLFSVGIVHYLVLFVTLYQRLSGRDGVPVLLRPVLFLFIAAPSVASLAWESIICRPNLFRRSMRRFNVAWWDYSFPITAFALVSTDYAEEMKGTFSHILMLLLLALSVLVSLALTMFTLLNSNMLLLDIYPSKLPQLILLMNSLLRHRNSTLAKVLDNVGMATQGSRSQIELVVDTTTTTSTVSSHTNSFSNYQHSTSFTTLLISVLTKLHAGYFRISLSLGSQALLWKTIITSEQDTTTLPHVLSRLPSAAVYALWSLSLFTLLLLSLLYLLRCFFFFKMVKAEFLHPVGVNYLFAPWISWLLLLESAPFVAPKTTLYFVMWWVFAVPMMVLDVKIYGQWLTKGKRVLSSAAGNPTSQLSVIGNLVGAQAAAHMGWKECALWLFSVGMVHYVVLFVTLYQRLSGRDGVPVLLRPVLFLFIAAPSVASLAWESIVGTFDTASKMLFFLSLFLFASLAKTVQKINEKVQRCMVGLLISDYCTCSCFNGLCRRSERNFFSHPNAPSVGSFSSRLSCSHHVYSPQL 745
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03448 745 FunFam S-type anion channel SLAH1 426 697 - -
Vimu10g03448 745 Gene3D - 44 348 IPR038665 -
Vimu10g03448 745 Gene3D - 425 694 IPR038665 -
Vimu10g03448 745 PANTHER S-TYPE ANION CHANNEL SLAH3 32 348 IPR030183 GO:0006873|GO:0008308|GO:0016020
Vimu10g03448 745 CDD TDT_SLAC1_like 49 322 - -
Vimu10g03448 745 Pfam Voltage-dependent anion channel 432 677 IPR004695 GO:0016020|GO:0055085
Vimu10g03448 745 Pfam Voltage-dependent anion channel 50 341 IPR004695 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03448 Vimu-Chr10 44284873 44294122 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03448 K26672 - gmx:100787036 449.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03448 10 44284873 44294122 Vimu10g03448 10 44284873 44294122 ECH