Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03352 ATGGCCATGGCCACAGCTGTCGTATGTCCTCAGAACATCACCGCCGGAGCCGTCGTCAGCTCACCTGCCAAGACCAAGAAGAGAATGAACAGAGTGGTACACATAAGAGGCCTTAATTCATTTGGGGGACTCAAGGCTAGCAATGATGTTGTGGCCTTGGGGCTACCCTTGAGCACTGAGAAGGGTTTCGCCAAGATTATGAGCTCGGTGAAAGCAACAGCATCCAATGGAAAAGGAAAGAGAGGAGGGGCGCTTTCATCCACTTGCAATGCCGCCGGTGAGATATTCACAATTGCTGCTATCATCAATGGCCTTGTTCTTGTGGGGGTTGCTGTTGGCTTTGTGCTCCTCCGAGTTGAAGCGTGGGTCGAGGAGTCTGAGGCAGAGTGA 390 0.5231 MAMATAVVCPQNITAGAVVSSPAKTKKRMNRVVHIRGLNSFGGLKASNDVVALGLPLSTEKGFAKIMSSVKATASNGKGKRGGALSSTCNAAGEIFTIAAIINGLVLVGVAVGFVLLRVEAWVEESEAE 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03352 129 Pfam PetM family of cytochrome b6f complex subunit 7 93 120 IPR012595 GO:0009512
Vimu10g03352 129 Hamap Cytochrome b6-f complex subunit 7 [petM]. 91 122 IPR012595 GO:0009512
Vimu10g03352 129 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 1 127 - -
Vimu10g03352 129 SUPERFAMILY PetM subunit of the cytochrome b6f complex 92 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03352 Vimu-Chr10 43601262 43601651 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03352 - - gmx:100306520 198.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03352 10 43601262 43601651 Vimu10g03352 10 43601262 43601651 ECH