Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03336 ATGCCATCGGTGCATTCCAGCCCGTGTTACCCGATGGAAAACCCGGCTTTGGCTTCTTTACTCCGTCACACGACCGGGGAGAGTAAGCGTAGCAGCAAATTCTCCAGCGGAGGAGGCCTTTTGAAAATGTTCAAGTTGTTTCCCATGTTGACTTCTGGATGCAAAATGGTGGCTCTCTTGGGAAGACCTCGGAAAATGCTAAAGGACAGCGCGACCACCGGGACCATCTTCGGTTACCGCAAGGGGAGGGTGAGTTTGGCCATACAAGAGGACACGCGTCAAATGCCCATTTTTCTGATCGAGCTGCCGATGCTGGCCAGTGCTTTGAACAAGGAAATGGCATCCGACATCATGAGGATTGCGTTGGAGAGCGAGACGAAGAGCAGCAAGAAGAAGCTGATGGAAGAGTTCGTGTGGGCGGTGTATTGCAATGGGAGAAAGGTGGGTTACTCCATCAGGCGGAAACAGATGAGCGATGATGAGCTCCACGTGATGCAGCATTTGAGAGGGGTGTCTATGGGAGCAGGGGTGCTCCCCACCGCATCGGATCATAAAGATTCCGACGGAGAAATGACGTACATGAGGGCAAGGTTTGAGAGGGTGGTCGGGTCTAAGGATTCAGAGTCTTTGTACATGATAAACCCAGATGGGGCTCAAGGCCCCGAATTGAGTATCTTCTTTGTTAGACCTCACTAG 696 0.5201 MPSVHSSPCYPMENPALASLLRHTTGESKRSSKFSSGGGLLKMFKLFPMLTSGCKMVALLGRPRKMLKDSATTGTIFGYRKGRVSLAIQEDTRQMPIFLIELPMLASALNKEMASDIMRIALESETKSSKKKLMEEFVWAVYCNGRKVGYSIRRKQMSDDELHVMQHLRGVSMGAGVLPTASDHKDSDGEMTYMRARFERVVGSKDSESLYMINPDGAQGPELSIFFVRPH 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03336 231 NCBIfam uncharacterized plant-specific domain TIGR01570 72 229 IPR006460 GO:0010274
Vimu10g03336 231 Pfam Protein of unknown function, DUF617 73 229 IPR006460 GO:0010274
Vimu10g03336 231 PANTHER PROTEIN MIZU-KUSSEI 1 28 229 IPR006460 GO:0010274
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03336 Vimu-Chr10 43500253 43502318 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03336 - - gmx:100782262 412.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03336 10 43500253 43502318 Vimu10g03336 10 43500253 43502318 ECH