Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03319 TCTTGGCAAGTCAAAGAAAACAGAAAGAGTGTTTCAAGACCAAAGGGAATTGAATCCGGAACAATGAAGATATTGGTGACCGGTGCATCCGGTTTCCTCGGGGGAAGACTCTGCGACGCGCTGCTCCGGCAAGGTTACTCCGTCAGGGTTCTGGTTAGGTCCACCAGCGATATCTCTTCTCTTTCTCCACATATCGAAATCTTCCACGGCGACATCGCCGACTACGCCTCTATCCTCGCCGCTTGCTCCTCCTGCACCATCGTATTCCACCTCGCCGCTCTCGTCGAACCCTGGCTTCCCGACCCCTCCAAATTCTTCTCCGTCAACGTTGGAGGATTGAAAAACGTGTTGGCGGCGGTGATGGAGACTCGCACGGTGGAGAAACTCCTGTATACGTCGTCGTTTTTCGCCCTCGGACCAACTGACGGAGGCGTTGCGGACGAGAATCAAGTCCATCACGAGAAATATTTCTGTACTGAATATGAGAAATCAAAGGTCGCTGCGGATAAAATTGCGCTGCAAGCTGCGTCGGAAGGGGTGCCAATAGTGTTACTGTATCCTGGAGTAATCTATGGGCCTGGCAAGGTCACTGCTGGAAACGTTGTTGCACGAATGCTAGTAGAACGCTTCAGTGGTCGATTACCTGGTTACGTAGGATATGGAAGCGATAAATTTTCTTTCAGTCATGTTGACGATGTGGTGGAGGGGCACATTTCAGCAATGAAGAAAGGAAAAGTTGGGAGGAGGTATCTACTAACAGGGGAAAATGCTTCCTTCAAGCATGTTTTTGATATGGCCGCTGTGATTACTGATACTAAAAAACCAGTGTTTAGCATACCTTTGTGGGTGATTGAAGTATACGGGTGGCTCTCAGTTTTATTCTCTAGAATCACTGGAAAGCTCCCTTTCATCAGTCCACCGACGGTCCATGTTCTAAGACACCGGTGGGAGTATTGTTGCGAGAAAGCTAAAAGTGAGCTAGATTATAGGCCAAGAAGCTTGAAAGAAGGGCTTGAGGAGGTACTACTCTGGTTGAAGAACTCCAAGTTCATTAAATATTAG 1062 0.4831 SWQVKENRKSVSRPKGIESGTMKILVTGASGFLGGRLCDALLRQGYSVRVLVRSTSDISSLSPHIEIFHGDIADYASILAACSSCTIVFHLAALVEPWLPDPSKFFSVNVGGLKNVLAAVMETRTVEKLLYTSSFFALGPTDGGVADENQVHHEKYFCTEYEKSKVAADKIALQAASEGVPIVLLYPGVIYGPGKVTAGNVVARMLVERFSGRLPGYVGYGSDKFSFSHVDDVVEGHISAMKKGKVGRRYLLTGENASFKHVFDMAAVITDTKKPVFSIPLWVIEVYGWLSVLFSRITGKLPFISPPTVHVLRHRWEYCCEKAKSELDYRPRSLKEGLEEVLLWLKNSKFIKY 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03319 353 Pfam NAD dependent epimerase/dehydratase family 24 250 IPR001509 -
Vimu10g03319 353 Gene3D - 11 352 - -
Vimu10g03319 353 FunFam NAD(P)-binding Rossmann-fold superfamily protein 21 352 - -
Vimu10g03319 353 CDD AR_FR_like_1_SDR_e 24 345 - -
Vimu10g03319 353 PANTHER PROTEIN YEEZ 22 342 - -
Vimu10g03319 353 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 21 348 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03319 Vimu-Chr10 43356706 43358902 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03319 19 254 Miscellaneous Gene Families AT1G09510 29.070 4.43e-21 90.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03319 K15891 - gmx:100792747 600.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03319 10 43356706 43358902 Vimu10g03319 10 43356706 43358902 ECH