Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03314 ATGCAAACGGTGGGGAGAATACTGAGTCAGGGCGTGTATACGGTTTCGGGGCCGTTTCATCCGTTCGGAGGCGCCGTCGATATTGTGGTGGTGGAACAGAAAGATGGCAGTTTCAAGTCGTCGCCCTGGTACGTTCGATTCGGCAAATTCCAGGGGGTTTTGAAGTCGAGGGAAAAGGTGGTGGATATCTGTGTCAACGGGGTGCCTGCTGATTTCCAAATGCATCTCGATCATAAGGGGGAAGCTTACTTTCTCAGGGAAGTCGTTGCACAAGAAGAAGACAATTTGGTGTTTCCGCCTTCTTCTGACAATGATAAAGACGATTACTCTCGCAGGTCCAAGAGTTGCGATTATGATGCAGAGGGTGCGGTAAAGAGTAATTCTCGCCGTTCAAGAATACTTAGCTTTGTTTTTGGGAGAAGGTCTTTGAAGCAGAGAGAAGGTAATGGTGAAGCGATTGGGAACAGGGTGGGATCGTTGGAGCGTGCTGAGATTGCAGCTAACTTGTTAGACCTCAAGTGGTCCACTAATCTCTCCGGGGAAAAAGGGCAAAAGGTTCTTGCTAACTCGTCTGGGGACGGTAACGTTGTCGTGGACGATGATGAGTTGAAAGAGGAAGCTTGTTTTGGTCGTGAGTGTGACTTGAATGGGAAGGAAGTAATGTATGATATTGCAGAGTCTGACGTGCAAGTTGCGTGCGTGAAGGTGAAGCTTGTGGAAAAGGAATTGAATGGGGAAGAAGTTTCTGGGGTGAGCGCTGTTGATGCATGTGATAATAGTAATGATATTTCCAAAAACGGTGTTTCGGCTGATGGGGTTTACCGTGAAACACCAGAGACCTCCAAGTTGGGCGTGTCGTGTTCTAGTGAACAAGCTGAAGATGTGATGTACCTTGATGGCGCACCAGAATGTGAAGAAGTCCGCGTCCATGTCCATGATGAAGTCTTGCATCGTGCCACTGTACTGCTATCTGAGGGTACAGAAGCTGTGGAAGTTATTGAGAAGGCCGATCTTGGGATGCCAGTACTGGGGATCTCTGAGTTCCATTCTGGGGTTCAGCAAATAGATTGTTTGGATTCTGGTGATATTATGTATAATGAGGTGGATATTGAAGATCAATCAATATCTACAACACCTAAAACTGTCAAAATTAGCCTAGGACATTTTTCAGGTGAGAAAGTTGAGCCCAATTATGTTATCAAACCTTCCAGCTACAGCATTCTGGATTACCAAGCCATAAGCGAGAATATGAAGGACAAGGAGTTCTCCAGCACATTATCGACTCCTCTGGACCCTGTTGATGATTGTTTACCTAGAAAAGCATCAAGGAGATCACCATCACTATGTTCAGAGGATGAAAGATTCCTTTTCAGTGACCTTGATGAAAGTGCAATCAATAATCGACCCGAGACAACACCCTTCCCTGAACATTTAGATAAAGAAGATCATGTTTCTTATGAGAATGACACTGAAAAGTTAACAGCAATATCCTGTCCCGTAGTAATTCCTAGAAATGAAGCTGCTGGAGAGAAAGTTGGGCAACATTCGGGATCCTTGCCAAACTTTTCTTCTAGAATTGACATTATGAATCAACATGATGTCCGTTACCCTTTAAGTCAATCACTGCAATCAAGATCAAAATCCTTGCCATGTGCATTTCATCCAAAAGATGATTTAGAATTTCTAAAACCTGATGAAGACAAAGGAAACAACCTAACACACGAGGAGTCAGGTACCAAGGATTATCATCATTCTGGGGAAATCAAAGATACAACTCTGAAGCTTCCCCTTGGCATGATACCAACTGACCAAGTTGAGAAAAATTATACAGGAGATGATCCATCAACACAGAACCCTTCCCCTGCTGGAAACTGGAGACTTTGGCCTTTCTCCTTGAGGAGAGCAGGATCTAAAGATTCTATATTGCCGCCCTCTCTAAGTGATGCCAAAAACACTACTGATGGTAATTCTCTAGAGAATACGACTAGCACAGTTATGAACAAAGATAAACCCAAACCCACAGCAGGATCTAAAGATTCCATATTGCCGCCTTCTCTAAGTGATGCCAAAAACACTAATGATCCAGAGAGTACGATTAGCACCGTTATGAACAAAGATAAACCCAAACCCAATTTTAAAAAAATAAAGGTTAGGGAAACAACTCCAACTTCTGAAGAGGTAGCCTCCTTGAATCTGAAGGATGGGATGAATACTGTAACCTTCACTTTCTCTACAGCTGTGCTGGGGAATCAGCAGGTCGATGCTCGAATATATCTGTGGAAATGGAACACTCGCATAGTGATCTCTGATGTGGATGGTACAATTACAAGGTCGGATGTTCTTGGCCAGTTCATGCCTTTGGTTGGTATTGACTGGTCACAGACAGGTGTTGCACATTTATACTCCGCTATTAAGGAGAATGGTTACCAACTTCTTTTTCTTAGTGCTCGTTCAATTTCTCAGGCCTATCTTACACGACAATTCCTAGTTAATCTTAAACAGGATGGAAAAGTTTTACCCGATGGTCCTGTTGTTATTTCTCCTGATGGACTTTTTCCTTCTCTGTATCGGGAAGGTAACGTCTCTTTCGTCTCTGCTGCTTCTTATTGTTACATTCTTCCAAGTGTTATTAGGAGGGTTCCCCACGAATTCAAAATTGCATGCTTAGAGGTCATCAAGGATCTTTTTCCTTCTGATTGCAATCCTTTCTATGCTGGTTTTGGTAATAGGGATACGGATGAAATCAGCTACCTTAAGGTTGGAATTCCCTTGGGAAAAATCTTCATAATTAATCCCAGGGGAGAGGTTGTTGTAAACCGTCGCGTTGACTCAAAATCATATGCTTCTCTGCATGCTCTCGTGAATGGAATATTCCCCCCTACGAACTCCCATGAACAGGTTTAA 2904 0.4339 MQTVGRILSQGVYTVSGPFHPFGGAVDIVVVEQKDGSFKSSPWYVRFGKFQGVLKSREKVVDICVNGVPADFQMHLDHKGEAYFLREVVAQEEDNLVFPPSSDNDKDDYSRRSKSCDYDAEGAVKSNSRRSRILSFVFGRRSLKQREGNGEAIGNRVGSLERAEIAANLLDLKWSTNLSGEKGQKVLANSSGDGNVVVDDDELKEEACFGRECDLNGKEVMYDIAESDVQVACVKVKLVEKELNGEEVSGVSAVDACDNSNDISKNGVSADGVYRETPETSKLGVSCSSEQAEDVMYLDGAPECEEVRVHVHDEVLHRATVLLSEGTEAVEVIEKADLGMPVLGISEFHSGVQQIDCLDSGDIMYNEVDIEDQSISTTPKTVKISLGHFSGEKVEPNYVIKPSSYSILDYQAISENMKDKEFSSTLSTPLDPVDDCLPRKASRRSPSLCSEDERFLFSDLDESAINNRPETTPFPEHLDKEDHVSYENDTEKLTAISCPVVIPRNEAAGEKVGQHSGSLPNFSSRIDIMNQHDVRYPLSQSLQSRSKSLPCAFHPKDDLEFLKPDEDKGNNLTHEESGTKDYHHSGEIKDTTLKLPLGMIPTDQVEKNYTGDDPSTQNPSPAGNWRLWPFSLRRAGSKDSILPPSLSDAKNTTDGNSLENTTSTVMNKDKPKPTAGSKDSILPPSLSDAKNTNDPESTISTVMNKDKPKPNFKKIKVRETTPTSEEVASLNLKDGMNTVTFTFSTAVLGNQQVDARIYLWKWNTRIVISDVDGTITRSDVLGQFMPLVGIDWSQTGVAHLYSAIKENGYQLLFLSARSISQAYLTRQFLVNLKQDGKVLPDGPVVISPDGLFPSLYREGNVSFVSAASYCYILPSVIRRVPHEFKIACLEVIKDLFPSDCNPFYAGFGNRDTDEISYLKVGIPLGKIFIINPRGEVVVNRRVDSKSYASLHALVNGIFPPTNSHEQV 967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03314 967 MobiDBLite consensus disorder prediction 608 624 - -
Vimu10g03314 967 MobiDBLite consensus disorder prediction 644 670 - -
Vimu10g03314 967 SMART lns2 766 939 IPR031315 -
Vimu10g03314 967 Pfam lipin, N-terminal conserved region 1 93 IPR007651 -
Vimu10g03314 967 MobiDBLite consensus disorder prediction 639 709 - -
Vimu10g03314 967 SUPERFAMILY HAD-like 758 927 IPR036412 -
Vimu10g03314 967 MobiDBLite consensus disorder prediction 604 627 - -
Vimu10g03314 967 MobiDBLite consensus disorder prediction 680 705 - -
Vimu10g03314 967 PANTHER LIPIN 1 960 IPR026058 -
Vimu10g03314 967 MobiDBLite consensus disorder prediction 560 589 - -
Vimu10g03314 967 Pfam LNS2 (Lipin/Ned1/Smp2) 720 959 IPR013209 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03314 Vimu-Chr10 43326159 43332154 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03314 K15728 - gmx:100811824 1206.05
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03314 10 43326159 43332154 Vimu10g03314 10 43326159 43332154 ECH