Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03312 ATGGAGTCCCGCGGACACTCAAACCCGCTTCTGTCGTTTTCCAGCTTCGTCCATCAACACTGCGTCCGTCTCGGGGCCGACCTCACCACTCGTTTGGATGACACAAGGCGAGCCCTAGCTCAAGCTCATCAAAATCTTTTGTCCCCCAAACATGCCCTTGCCGCCACTGCCACATTGGGCGCCAATCACGTCGCCAAGTCCCTCATCGGCACCTCTGTTTACACCGTCAGCAATTCCAACAATGAGTTCGTTCTTATCTCCGACGCTGACGGTGCCAAGTCCATTGGATTGCTCTGCTTTCGCCAAGAGGACGCCCAAGCCTTCCTCGCTCAGGTTCGATCAAGTAGCAGAGAACTTCGAAACAAGGCTAGGGTTGTTCCAATTACTCTCGACCAGGTATACATGTTGAAGGTGGAAGGCATTGCATTCCGATTCTTACCTGATCCAGTTCAAATAAAAAATGCTTTGGAGCTCAAACCAGCCAACAAGGGAGGCTTTGATGGAGTTCCTGTTTTTCAGTCTGAACTTTTGGTTGTGAAGAAGAAGAACAAGCGTTACTGCCCTGTGTATTTCTCTAAGGAGGATATTGAGCAGGAGCTGTCCAAGGTTTCCAGGGCATCTAGAGCACCTGGTGCTTCTCAGCAAATAGTGGTTGGTAGCTTGGAGGATGTACTGAAAAAAATGGAGATGAGTGAAAGGAGTTCAGGATGGGAGGATTTGATTTTTATTCCCCCAGGAAAAAGTCACTCTCAGCACATACAAGAAATTACTGAATGA 777 0.4878 MESRGHSNPLLSFSSFVHQHCVRLGADLTTRLDDTRRALAQAHQNLLSPKHALAATATLGANHVAKSLIGTSVYTVSNSNNEFVLISDADGAKSIGLLCFRQEDAQAFLAQVRSSSRELRNKARVVPITLDQVYMLKVEGIAFRFLPDPVQIKNALELKPANKGGFDGVPVFQSELLVVKKKNKRYCPVYFSKEDIEQELSKVSRASRAPGASQQIVVGSLEDVLKKMEMSERSSGWEDLIFIPPGKSHSQHIQEITE 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03312 258 PANTHER PROTEIN TIC 22, CHLOROPLASTIC 7 254 IPR007378 GO:0015031
Vimu10g03312 258 Pfam Tic22-like family 10 255 IPR007378 GO:0015031
Vimu10g03312 258 Gene3D - 147 231 - -
Vimu10g03312 258 Gene3D - 72 146 - -
Vimu10g03312 258 FunFam Protein TIC 22, chloroplastic 63 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03312 Vimu-Chr10 43314476 43318844 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03312 - - gmx:100802935 467.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03312 10 43314476 43318844 Vimu10g03312 10 43314476 43318844 ECH