Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03311 ATGCAAGGTTTGAGTGTTCGAAAGATGCTGAAGACAATGCCATCTAAAGCTTTGATCACCATAATCAATTTTGTTTTCCTCATTGTCTTTCTGCTTGTTTATGCCACCATTCTTCCCCATCCATCTTCTGACTATTTGGAGAATGCGAGCTCCCTTGTGAGGTGCTCCTTGGGCGAATGTCATCACAAGAAGGCAGAAAAAAGCCTGAAAATGGTATTGGAAGAACCTCAAGAAAACCAACACAGGGAAAAGAATGTAGTACCAAGCTTTTTTGGCGAGATGGGGAAAGGAACGAGGATAGGGATGGTGAACATGGAAGAAGGCCTTGGGAGAGAATGGAACACGCATGGGGAAACCACGAGGGTTCATTTCCAGAGAGTATCACAGTCTCTGAACTGGACAGACTTGTTTCCTGAATGGATAGACGAGGAAGAAGAGAATGACGTGCCGTCGTGTCCGGAGATACCTATGCCAGAGTTTGCAGAATATGGATGCATGGACATCATCGTTGCCAAGCTGCCATGCAGGTATCCCGAGAAAGGGTGGAACAGGGACGTTTTTAGGTTGCAAGTTCATCTTATAGTTGCGAATTTAGCCACAAAGAATGGGAAGAAGGATTGGAGAGGGAAGACTAGATTGGTTTTTTGGAGCAAGTGTAGACCAATGATGGAACTGTTTTCATGCGACAACTTGGTTAAGCGGGAAGGTGAATGGTGGTACTATGAAGCTGACATGAATAAGTTACAACACAAAGTTTCATTGCCCGTCGGTTCGTGCAAGTTGGCCATGCCTCTCTGGGAACAAGGAAGGAAGGAGTTGTTGAAGAGTGAGAAAAACGGTGGGAAAATGAAGCGCGAAGCCTATGCGACAGTGTTGCATTCCTCGGAAGCATACGTTTGCGGCGCAATAACACTAGCACAAACCCTCCTCCAAACAGGGACCAAACGCCACCTAATCCTCCTCGCGGATAAGTCAATCTCCGTTCCCAAATGCAGGGCCCTATCGGAAGCGGGTTGGAAGATCCGAATGATTACCCGGATCCGAAACCCAAGGGCAGAGAAGGGAAGTTACAATGAATACAACTACAGCAAGCTCCGACTGTGGCAGCTCACCGACTACCACAAAATAATCTTCATCGATTCTGACATCATCGTTCTCCGGAACCTGGACATCCTCTTCCGCTACCCGCAGATATCCGCCACGGGGAACGACCAATCGATATTCAACTCCGGGATAATGGTGATCGAACCTTCGAACTGCACGTTCGGCGAGCTGATGCGGCTTCGCGATGTCATCGTTTCGTACAACGGAGGGGACCAGGGGTTTCTGAACGAGGTGTTGGTGTGGTGGCACAGGCTGCCGCGGAGGGTGAACCTTCTAAAGAATTTCTGGGCGAACACGAGTGCAGAGGCAAGGGAGAAGAATGCGCTCTTCGGGGCGGAGCCGGCGGAGGTGTATGCGATTCACTATCTGGGGTGGAAGCCCTGGCACTGCTTCAGGGACTACGACTGCAATTGGGACACCCTGGAGCAGAGGGTGTACGCCAGTGACGTGGCGCACCGGAGATGGTGGAAGGTTCACGACGCCATGGAGGAGGGTTTGCAAAGATTATGTGGGTTGACGAAACGGCGTCGCACTGAGCTGAAGTGGGAGAGGAGGAAGGCTCGGAGCATGGGCTTTTCTGATGGACATTGGAAAATCAATATCACTGATCCCAGACGATTTAACTCTCTTCTCATCCACTAG 1746 0.4989 MQGLSVRKMLKTMPSKALITIINFVFLIVFLLVYATILPHPSSDYLENASSLVRCSLGECHHKKAEKSLKMVLEEPQENQHREKNVVPSFFGEMGKGTRIGMVNMEEGLGREWNTHGETTRVHFQRVSQSLNWTDLFPEWIDEEEENDVPSCPEIPMPEFAEYGCMDIIVAKLPCRYPEKGWNRDVFRLQVHLIVANLATKNGKKDWRGKTRLVFWSKCRPMMELFSCDNLVKREGEWWYYEADMNKLQHKVSLPVGSCKLAMPLWEQGRKELLKSEKNGGKMKREAYATVLHSSEAYVCGAITLAQTLLQTGTKRHLILLADKSISVPKCRALSEAGWKIRMITRIRNPRAEKGSYNEYNYSKLRLWQLTDYHKIIFIDSDIIVLRNLDILFRYPQISATGNDQSIFNSGIMVIEPSNCTFGELMRLRDVIVSYNGGDQGFLNEVLVWWHRLPRRVNLLKNFWANTSAEAREKNALFGAEPAEVYAIHYLGWKPWHCFRDYDCNWDTLEQRVYASDVAHRRWWKVHDAMEEGLQRLCGLTKRRRTELKWERRKARSMGFSDGHWKINITDPRRFNSLLIH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03311 581 Pfam Glycosyl transferase family 8 291 394 IPR002495 GO:0016757
Vimu10g03311 581 PANTHER GLYCOGENIN SUBFAMILY MEMBER 183 574 - -
Vimu10g03311 581 SUPERFAMILY Nucleotide-diphospho-sugar transferases 283 535 IPR029044 -
Vimu10g03311 581 CDD GT8_Glycogenin 286 530 - -
Vimu10g03311 581 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 282 532 IPR029044 -
Vimu10g03311 581 FunFam Hexosyltransferase 283 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03311 Vimu-Chr10 43309150 43312397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu10g03311 87 580 Glycosyltransferase AT4G33330 66.335 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03311 K20890 - gmx:100812365 966.837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03311 10 43309150 43312397 Vimu10g03311 10 43309150 43312397 ECH