Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03306 ATGCCGCCGTTTTTGTCGACCTCGAAAGCCCTTTGCTCCTTAGCATCACGCAAAAGCGGTGCGAGTCAATTGATTAGGTCGAGCAAGGGCAGATCAATCACAGCCATTACCGGCCATCACATTCAGCCTTCTGTCTCTCGCATCGGCTTTTCCTCTATCATAGGAGGATCTAGTAATAGTAACAATAATAACAATTATAATGCTGTTCACACTAGACAGTTTCTTGGATGTGGAGATGGTGAAGAAGGGATTCTATCCAAAACTTACGAGGAGAGACGCGTTTTGGGGTACTCTCCGGAACAATTATTTGATGTTGTTGCAGCTGTTGAGTTCTATCACGGTTTTGTTCCATGGTGTCAAAGGTCAGACATACTTAGACACCATCCAGACGGATCATTTGATGCCGAGTTGGAGATCGGATTTAAATTCCTTGTTGAAAGTTATGTTTCTCATGTACAAGTAGACAGGCCAAAGCGAATAAAGGTATTCAATCATCTCCAGTGTATTTTAGTTATGTTTTGCTTGCATTCCAGAGTATCATGGTTCTTGGTGCTAAAAGCATTAATGCTGATTGAAAATTTTGATGGCTTTTATTTGCAACGGGTGCCAACTCCACAGTCCCTTCTGCCAGTAATGCGCAACAGGTTCCTCACTCCATCTCCAAAGTTGCCTTTATTCTTCCTTTACCTTAGTATACTTTTGTCATATTATGCTATTGTGATGCTTGAGCATGATATGGCCATTCCATCTGTGACAACCGTGTCAGAAAGTACCTTGTTTGACCATTTAATAAACGTATGGGAATTTAACCCTGGCCCTGTTCCTGGAAGTTGCAATCTTTATTTCTTGGTGGATTTTAAATTTCACTCTCCACTTTACAGACAGATTGCTTCAATGTTCTTTAAGGAGGTAGCCTCTAAGATGGTTGGTTCATTTACAGAGCGTTGCCGTTTGATATATGGACCGGAAGTGCAGGTCCATGAAAACCCGTATGGAAAAAGGGCATAG 1008 0.4187 MPPFLSTSKALCSLASRKSGASQLIRSSKGRSITAITGHHIQPSVSRIGFSSIIGGSSNSNNNNNYNAVHTRQFLGCGDGEEGILSKTYEERRVLGYSPEQLFDVVAAVEFYHGFVPWCQRSDILRHHPDGSFDAELEIGFKFLVESYVSHVQVDRPKRIKVFNHLQCILVMFCLHSRVSWFLVLKALMLIENFDGFYLQRVPTPQSLLPVMRNRFLTPSPKLPLFFLYLSILLSYYAIVMLEHDMAIPSVTTVSESTLFDHLINVWEFNPGPVPGSCNLYFLVDFKFHSPLYRQIASMFFKEVASKMVGSFTERCRLIYGPEVQVHENPYGKRA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03306 335 SUPERFAMILY Bet v1-like 88 163 - -
Vimu10g03306 335 CDD COQ10p_like 89 317 IPR044996 GO:0006744|GO:0045333|GO:0048039
Vimu10g03306 335 PANTHER SPERM PROTEIN HOMOLOG 60 162 IPR044996 GO:0006744|GO:0045333|GO:0048039
Vimu10g03306 335 Pfam Polyketide cyclase / dehydrase and lipid transport 96 312 IPR005031 -
Vimu10g03306 335 Gene3D - 86 173 IPR023393 -
Vimu10g03306 335 Gene3D - 231 321 IPR023393 -
Vimu10g03306 335 SUPERFAMILY Bet v1-like 251 321 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03306 K18588 - gmx:100778674 250.751
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03306 10 43281751 43285690 Vimu10g03306 10 43281751 43285690 ECH