Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03305 ATGGCTTTGCCTTCTTTACTACCCAAAACGGCACCGCATCTTCTTTCCCTCACAAACCCCTTCTCTTCCTCTCCCTCTACTCTCATCGTACCTTTCCGCTTCCACTTTTTCTCTCATCTTCCTCCTCTCTCTCTTCTCAAAGCCGCTTCCTCCGCCGGCGATAGTTTGCGCAGCAAGCCCCTCATGTCCCAAAGAAGGGGGATTTTGGAGGAACACGGCAGCCAAGCCTTTGAGGAAGAAGACGACGACAAATGGATTGACTGGGAGGACCAGATTTTGGAGGACACAGTTCCTCTCGTTGGTTTCGTCAGGATGATTCTCCATTCTGGACAATATGAAAGTGGAGATAGACTAAGTGAAGAGCATGAGAAAACCATTATTGAGAAGCTGCTTCCCTTTCATCCAGAATTTGAGCAAAAGATCGGATGTGGAGTTGATTATATCACGCTTAACTGTGGTTTCTCGGTTGATGTGAGACAGTGGGGTGCTTTCATTGCATTTGCAGCTTCCATCACCTTCATTGTGTTGGATGTGAGACAGTGTGGCTCTGCTACAGATAAGTTTTTTCAGGATTTTCATACTAAACTTGTATTGATTTTTCCAATTGGATATCATCCTGATTTTGAACGCTCAAGGTGTTTGTTCATTGTTCGACAAGATGGTCAAGTGGTTGATTTTTCATATTGGAAATGTATAAAGGGCTTGATCAGAAAGAACTATCCATTATATGCAGACACTTTCATTCTCAGACATTTCAGGAAGAAAAGTCGTAATTTGTGA 780 0.4346 MALPSLLPKTAPHLLSLTNPFSSSPSTLIVPFRFHFFSHLPPLSLLKAASSAGDSLRSKPLMSQRRGILEEHGSQAFEEEDDDKWIDWEDQILEDTVPLVGFVRMILHSGQYESGDRLSEEHEKTIIEKLLPFHPEFEQKIGCGVDYITLNCGFSVDVRQWGAFIAFAASITFIVLDVRQCGSATDKFFQDFHTKLVLIFPIGYHPDFERSRCLFIVRQDGQVVDFSYWKCIKGLIRKNYPLYADTFILRHFRKKSRNL 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03305 259 Pfam Protein of unknown function (DUF3223) 200 232 - -
Vimu10g03305 259 Pfam Protein of unknown function (DUF3223) 105 152 - -
Vimu10g03305 259 Coils Coil 253 259 - -
Vimu10g03305 259 Gene3D - 94 235 - -
Vimu10g03305 259 PANTHER PROTEIN EMBRYO DEFECTIVE 514 71 255 IPR044673 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03305 Vimu-Chr10 43274520 43278311 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03305 - - gmx:100306718 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03305 10 43274520 43278311 Vimu10g03305 10 43274520 43278311 ECH