Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03302 ATGGAAGACGGTGAGATAGAAGAGGGATCAATAGGTGGTGTAGAGGAAGAGGAGCATTCCTCAGAGCCTCACAAGTCGGAGGAATCACCCTACGAAATGTTGCGCAACAGCAAGGCTTCCGTAGAGAACATCGTCGCCGAAATACTCTCCATTAAAAAAGACCGAAAACCTAAACAACATCTTCGGGATCTCGCTACTCAGATGTTCTTACACTTCATCACTCTTCGCCAGGCAAATCGCTCTATATTGCTCGAGGAAGACCGCGTCAAAACCGAAACGGAGCGTGCCAAGGCACCGGTGGATTTCACTACGCTGCAGCTTCACAACCTCATGTACGAGAAAAACCACTATGTTAAGGCGATAAAGGCCTGCAAAGACTTCAAATCGAAATATCCTGACATTGACCTTGTTCCCGAGGAGGAGTTTTTCCGCGACGCTCCACAAGATATCAAGGACTCCGTTTTGTCGAATGACGCTGCGCACAATCTCATGCTCCGGAGGCTCAATTTCGAGTTATTCCAGCGTAAAGAACTCTGCAAACTTCATGAGAAGCTGGAACTGCAGAAGAAAATCCTCTTGCAGACTATTGCAAACCGAAAGAAGTTCCTGACAAGTCTCCCATCACATCTCAAATCTCTTAAGAAGGCCTCCTTGCCTGTACAAAACCAGCTCGGGCTTCATCATACTAAGAGATTAAAGCAGCATCATTCTGCAGAGTTACTTCCTCCAGCCCTATACGTGATTTACTCACAGTTGTTGGCTCAAAAGGAGGCCTTTGGAGAACCCATTGATCTGGAGATTATAGGAAGCCTGAAAGATGCTCAAGCTTTTGCTCGTCAACAGGCTCACAAGGACAATGACAATTCCACTACAGTGGAGAGTTCAAAATTGGAAGACGATGCTCCTGATGAAGAAGAAGATGGTCAGAGACGGAGGAAAAGGCCACGGAGGGTTCAAGCAAAGGAGAGCCTTGACCAGGGGGGAATATTTCAAGTTCACCCACTTAAAATCATTATCCATGTGTACGAAGATCAGCATTCTGATTCAAAATCTTCCAAACTTATTACCCTAAGGTTTGAGTATTTGGTGAAGTTGAACGTTGTATGTGTTGGAATAGAAGGTTCTAATGAAGGTCCGGAAAACGATATATTATGTAATTTATTCCCTAATGATACGGGACTTGAGCTTCCCCAGCAGTCTGCCAAACTCTTTGTCCAAGATGCTATAGCATTCAATACTCTAAGAACTTCACGTCCTTACAAATGGGCTCAGCACTTGGCGGGGATTGAATTCTTGCCTGAGGTGTCTCCTTTACTTCTTACTGATGACAGTGGAGCAGCGAAGAATGAAAATGTTATATCTGGTCTTTCACTATATCGCCAGCAGAACCGAGTATTGACAGTTCTGCAGAGAATTCGCGATAGAAGAAAAGCTCAATTGGCTCTTCTGGAACAGCTAGAATCTCTCGCAAAGCTTGACTGGCCTCGTTTGTCCTGCAGAAGTGTTCCTTGGGCTTTTCACACTCCGCTGTGCAATTTGGATAGTTGGTCACCAGTAAGACTTCCACCTGTACCTAGAGAGTCCTCATCTCCTGCTGTCATCGATGAAGAGGAGCATGTACAGGAACCAATGGATGTTGATGTAAATGAACGTTCTGATGTCACAAAAACAGAACCTGAGAGTATTACAGAAGATGGGGAGCTTCCAACTTTGCTTCCTAACATGTCCAAGCTTGACCATTCCACACAGCTGAACTTGATTTCTAAAAGTATCGTTCCTCCACTCAATAAAATCAGGTCACAGAGTTTCAAAAAGTTTGATGACAGTTCTGATTTCTTGCTGGATACTGAAAGTGATATAGATGAACCAGCGCAGACTGAACTAGAACATGAAAGTACATTATCCAATTACCATGACAGAAATTCTGTATCATGGATGGATCACGGGCTCAAGGAATTTTGTTTGGTTCTTTGCAGAAAAATCAGTGCAGATGAGAACAATGTTAATTTAGAAGCTAAGATAAAGATCAGTATGGAATATCCTCTAAGGCCTCCTCTTTTTGCATTGAGCGTTCGCTGTATATCTTCTGGGGAAAAGCGTGATAAGTTAGGATTAGAGTGGTATAATGAACTCCGTGCAATGGAAGCAGAGGTCAATCTACACATACTGAGGATGCTACCTGTCAATCAACAAAATTATGTACTCGCTCATCAAATTAGTTGTCTTGCCATGTTGTTCGACTATTATTTGGATGAGGCATTCCCATCGTCTGAAAGGACAAATTGTACTTCCGTGGTTGATGTTGGCTTATGTAAGCCTGTTACTGGTCGATTCCTGGGTAGATGTTTTAGAGGAAGGGATCGCAGGAAGATGATCTCCTGGAAAGACATGAAACTCAATTCCAGCTGTCCCCAATAG 2418 0.4367 MEDGEIEEGSIGGVEEEEHSSEPHKSEESPYEMLRNSKASVENIVAEILSIKKDRKPKQHLRDLATQMFLHFITLRQANRSILLEEDRVKTETERAKAPVDFTTLQLHNLMYEKNHYVKAIKACKDFKSKYPDIDLVPEEEFFRDAPQDIKDSVLSNDAAHNLMLRRLNFELFQRKELCKLHEKLELQKKILLQTIANRKKFLTSLPSHLKSLKKASLPVQNQLGLHHTKRLKQHHSAELLPPALYVIYSQLLAQKEAFGEPIDLEIIGSLKDAQAFARQQAHKDNDNSTTVESSKLEDDAPDEEEDGQRRRKRPRRVQAKESLDQGGIFQVHPLKIIIHVYEDQHSDSKSSKLITLRFEYLVKLNVVCVGIEGSNEGPENDILCNLFPNDTGLELPQQSAKLFVQDAIAFNTLRTSRPYKWAQHLAGIEFLPEVSPLLLTDDSGAAKNENVISGLSLYRQQNRVLTVLQRIRDRRKAQLALLEQLESLAKLDWPRLSCRSVPWAFHTPLCNLDSWSPVRLPPVPRESSSPAVIDEEEHVQEPMDVDVNERSDVTKTEPESITEDGELPTLLPNMSKLDHSTQLNLISKSIVPPLNKIRSQSFKKFDDSSDFLLDTESDIDEPAQTELEHESTLSNYHDRNSVSWMDHGLKEFCLVLCRKISADENNVNLEAKIKISMEYPLRPPLFALSVRCISSGEKRDKLGLEWYNELRAMEAEVNLHILRMLPVNQQNYVLAHQISCLAMLFDYYLDEAFPSSERTNCTSVVDVGLCKPVTGRFLGRCFRGRDRRKMISWKDMKLNSSCPQ 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03302 805 MobiDBLite consensus disorder prediction 550 570 - -
Vimu10g03302 805 Coils Coil 469 489 - -
Vimu10g03302 805 MobiDBLite consensus disorder prediction 13 32 - -
Vimu10g03302 805 MobiDBLite consensus disorder prediction 279 323 - -
Vimu10g03302 805 Pfam Fms-interacting protein/Thoc5 74 431 IPR019163 -
Vimu10g03302 805 MobiDBLite consensus disorder prediction 305 321 - -
Vimu10g03302 805 PANTHER FMS INTERACTING PROTEIN 18 800 IPR019163 -
Vimu10g03302 805 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03302 Vimu-Chr10 43252635 43258596 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03302 K13174 - gmx:100816115 1325.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03302 10 43252635 43258596 Vimu10g03302 10 43252635 43258596 ECH