Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03263 TCCAAAACCGCTCTTGATCCTGACAAGCTTGTCACCATTCAAATTCCTCCAACGCTGAAGAAACAATTACTTGATGATTGTGAGTTTATTAACCATCTCGGCAAGCTCGTTAAACTTCCTCGTTCTCCTAATGTGAAAGACATATTGAAAAATTATTTTGATTACAGATTGAAGAAATGTGGCTCGATGGCTGATTCTGTTGAAGAAATTATGAAAGGATTGTGTCGTTACTTTGATAAAGCACTTCCAGTGATGCTCTTGTACAAGACCGAGCGCCAACAGTACCAAGAAGCTTGTCCAGCCAACGTGTTTCCTTCTGCTATATACGGTGCTGAACATTTGTTACGCCTCTTTGTTAAGTTGCCCGAGCTATTGTTCCATGCTAGCATTGAAGAGGAGACGTTGACAGAGCTTCGGGCACAATTACTTGACTTTCTCAGGTTTTTGCAAAAAAACCACAGCACGTTTTTCCTTTCTACTTACCATGTTGCTGAAGATATTGAAATCAGCTCCGACAAAAAAGGTGACTAG 531 0.4068 SKTALDPDKLVTIQIPPTLKKQLLDDCEFINHLGKLVKLPRSPNVKDILKNYFDYRLKKCGSMADSVEEIMKGLCRYFDKALPVMLLYKTERQQYQEACPANVFPSAIYGAEHLLRLFVKLPELLFHASIEEETLTELRAQLLDFLRFLQKNHSTFFLSTYHVAEDIEISSDKKGD 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03263 176 Gene3D MRG domain 7 174 IPR038217 -
Vimu10g03263 176 Pfam MRG 7 161 IPR026541 -
Vimu10g03263 176 FunFam Chromatin modification-related protein EAF3 7 170 - -
Vimu10g03263 176 ProSiteProfiles MRG domain profile. 7 174 - -
Vimu10g03263 176 PANTHER MORTALITY FACTOR 4-LIKE PROTEIN 2 165 IPR008676 GO:0005634|GO:0006325|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03263 Vimu-Chr10 42906631 42908121 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03263 K11339 - gmx:100777259 304.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03263 10 42906631 42908121 Vimu10g03263 10 42906631 42908121 ECH