Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03243 ATGCAGAAGAAATTCGAGGAAGACGACACTCCGCGAAGCTTCGAGAGTGTGGGACTGGTGATCGGCGTAACGGGCATCGTCGGAAACAGCCTCGCCGAGATCCTGCCTCTCGCTGACACCCCAGGCGGTCCATGGAAAGTCTATGGCGTGGCACGGCGCCCGCGGCCGCCGTGGAACGCCGATCACCCCATCGAGTACGTTCAGTGCGACGTTTCCGATCCCGCCGACGCTGAAAGCAAACTCTCCGTCTTGACCGACGTCACGAACATTTTCTTCGTGTCGTGGACTAACCGTCCCACCGAGGCCGAGAACTGTGAAGTTAACGGCGCGATGTTACGGAACGTGCTGCGCGCCGTTATCCCTAATGCTCCCAATCTTCGTCACGTGTCCCTTCAGACAGGCACCAAACACTACCTCGGATCGTTCGAATCCGTAGGCAAGATCCAATCCCACGAGCCCCCCTTCACGGAGGATCTCCCGCGATTGGACACGCCAAATTTTTACTACACTCAAGAGGACATTCTCTTTGAAGAGACCGCTAAGAAAGAGGGTTTGACTTGGTCCGTACACAGGCCCGGAACAATATTTGGCTTTTCTCCCTACAGTTTGATGAACCTGGTTGGGAGTGTTTGCGTTTACGCCGCAATTTGCAAGCACGAAGGGATTCCGTTGAGATTTCCCGGCACCAGAGGCGCCTGGGAGGGTTATTCCTTTTCTTCCGATGCGGATTTGATTGCGGAGCAGCATATTTGGGCCGCTGTTGACCCCTATGCGCGGAATGAAGCATTTAACTGTTCCAATGGTGATGTGTTCAAGTGGAAGCATCTTTGGAAGGTATTGGCTGAACAGTTTGGGATTGAGGAGTATGGTTTTGAAGAAGGTTCGAGTTTGAGGCTGTCGGAAGCGATGAAGGATAAGGGTCCTGTTTGGGATGAGATTGTGAGCCAGAATCAGCTTCTGCCTACCAAGCTTGACGAGGTTGGTGATTGGTGGTTTGTGGATTTTATCTTCTCCGGAGAGGGATTAGATAGCATGAACAAGGCCAAAGAACATGGGTTTTTGGGATTCAGGAACTCCAAGAATTCGTTCATAAGTTGGATAGACAAGACCAAGGGTTATAAGATTGTGCCTTGA 1134 0.5203 MQKKFEEDDTPRSFESVGLVIGVTGIVGNSLAEILPLADTPGGPWKVYGVARRPRPPWNADHPIEYVQCDVSDPADAESKLSVLTDVTNIFFVSWTNRPTEAENCEVNGAMLRNVLRAVIPNAPNLRHVSLQTGTKHYLGSFESVGKIQSHEPPFTEDLPRLDTPNFYYTQEDILFEETAKKEGLTWSVHRPGTIFGFSPYSLMNLVGSVCVYAAICKHEGIPLRFPGTRGAWEGYSFSSDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFGIEEYGFEEGSSLRLSEAMKDKGPVWDEIVSQNQLLPTKLDEVGDWWFVDFIFSGEGLDSMNKAKEHGFLGFRNSKNSFISWIDKTKGYKIVP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03243 377 CDD 5beta-POR_like_SDR_a 17 317 - -
Vimu10g03243 377 Gene3D - 16 377 - -
Vimu10g03243 377 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 19 287 IPR036291 -
Vimu10g03243 377 PANTHER 3-OXO-DELTA(4,5)-STEROID 5-BETA-REDUCTASE 15 377 - -
Vimu10g03243 377 FunFam Iridoid synthase 14 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03243 Vimu-Chr10 42795959 42797092 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03243 K22419 - gmx:100813467 700.279
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03243 10 42795959 42797092 Vimu10g03243 10 42795959 42797092 ECH