Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03212 ATGAGAAAGGGCAAGGAGCAGAAGCAGAACAAGTTCGTGTGGATCATAACCACGCCTTTCAGAGTCTTGGGCAAAGCCAGGGATGCTTACGTCAGAAGCATAACACAGTGTGGTCACAACATGAACTATAGCAACCCCGTTGATGCTGCTGGTAGATTCGAGGCTCTCCCCAGAAGCTACAGTGTTGCCACCTCACGCTCCGACAACGAGGATTTCGCCGAGCTTTTGCGAGCGGCTTCTGCCAGGACCCTGGGCAACAGAATCGACGTGGATTTGGTTCTGAAACAGCAGGCCCAGTCCCGGCCGCCCATTTCCTCTAATGGACTTCCGAAGTCCACGAGCGTCGGCATGGGCCGGATCGACGAGGACACGCCTTATGATTTGTCCGAAGGAGATGTTGGCACCCTTCCCAAATCGTATCCCAGAAGTAGAAGCTACGCTGTCGGAAAGACGAGTGCTGTACTGTGA 468 0.5406 MRKGKEQKQNKFVWIITTPFRVLGKARDAYVRSITQCGHNMNYSNPVDAAGRFEALPRSYSVATSRSDNEDFAELLRAASARTLGNRIDVDLVLKQQAQSRPPISSNGLPKSTSVGMGRIDEDTPYDLSEGDVGTLPKSYPRSRSYAVGKTSAVL 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03212 155 MobiDBLite consensus disorder prediction 98 143 - -
Vimu10g03212 155 PIRSF UCP031279 1 155 IPR016972 -
Vimu10g03212 155 PANTHER OS07G0123800 PROTEIN 1 152 - -
Vimu10g03212 155 MobiDBLite consensus disorder prediction 98 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03212 Vimu-Chr10 42555904 42558332 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03212 - - gmx:100785988 263.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03212 10 42555904 42558332 Vimu10g03212 10 42555904 42558332 ECH
Vimu1g02898 1 41385913 41386335 Vimu10g03212 10 42555904 42558332 PCT